Brara.C04683.1

Description : E3 ubiquitin ligase *(AIRP1)

Gene families : OG_42_0000832 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000832_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.C04683.1
Cluster	HCAA Clusters: Cluster_400

Target	Alias	Description	ECC score	Gene Family Method
Brara.A01345.1	No alias	E3 ubiquitin ligase *(AIRP1)	0.03	Orthogroups_2024-Update
Brara.G02490.1	No alias	E3 ubiquitin ligase *(AIRP1)	0.02	Orthogroups_2024-Update
Glyma.08G016300	No alias	RING/U-box superfamily protein	0.04	Orthogroups_2024-Update
Pp1s455_5V6	No alias	zinc finger (c3hc4-type ring finger) family protein	0.01	Orthogroups_2024-Update
Solyc01g094840	No alias	RING/U-box superfamily protein, putative (AHRD V3.3 ***...	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
MF	GO:0004664	prephenate dehydratase activity	IEP	Predicted GO
BP	GO:0006508	proteolysis	IEP	Predicted GO
BP	GO:0006558	L-phenylalanine metabolic process	IEP	Predicted GO
BP	GO:0009094	L-phenylalanine biosynthetic process	IEP	Predicted GO
BP	GO:0009095	aromatic amino acid family biosynthetic process, prephenate pathway	IEP	Predicted GO
MF	GO:0031625	ubiquitin protein ligase binding	IEP	Predicted GO
MF	GO:0044389	ubiquitin-like protein ligase binding	IEP	Predicted GO
MF	GO:0050664	oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor	IEP	Predicted GO
BP	GO:1902221	erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process	IEP	Predicted GO
BP	GO:1902223	erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001841	Znf_RING	107	150

External Links

No external refs found!