1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.C04694.1

Brara.C04694.1


Description : Unknown function


Gene families : OG_42_0000656 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000656_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.C04694.1
Cluster HCAA Clusters: Cluster_70

Target Alias Description ECC score Gene Family Method Actions
Brara.I04453.1 No alias tyrosine aminotransferase *(TAT) & EC_2.6 transferase... 0.04 Orthogroups_2024-Update
Brara.K01103.1 No alias tyrosine aminotransferase *(TAT) & EC_2.6 transferase... 0.04 Orthogroups_2024-Update
Glyma.12G161500 No alias Tyrosine transaminase family protein 0.06 Orthogroups_2024-Update
HORVU1Hr1G015090.2 No alias tyrosine aminotransferase *(TAT) & EC_2.6 transferase... 0.04 Orthogroups_2024-Update
MA_102057g0010 No alias (at5g53970 : 414.0) encodes tyrosine aminotransferase... 0.02 Orthogroups_2024-Update
PSME_00035624-RA No alias (at2g20610 : 180.0) Confers auxin overproduction.... 0.03 Orthogroups_2024-Update
Potri.017G014100 No alias Tyrosine transaminase family protein 0.03 Orthogroups_2024-Update
Seita.8G150700.1 No alias tyrosine aminotransferase *(TAT) & EC_2.6 transferase... 0.02 Orthogroups_2024-Update
Sobic.002G041100.1 No alias tyrosine aminotransferase *(TAT) & EC_2.6 transferase... 0.05 Orthogroups_2024-Update
Sobic.002G041200.1 No alias tyrosine aminotransferase *(TAT) & EC_2.6 transferase... 0.03 Orthogroups_2024-Update
Sobic.008G005300.2 No alias tyrosine aminotransferase *(TAT) & EC_2.6 transferase... 0.03 Orthogroups_2024-Update
evm.model.contig_3449.1 No alias (at5g53970 : 234.0) encodes tyrosine aminotransferase... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0009058 biosynthetic process IEA 16Dec
MF GO:0030170 pyridoxal phosphate binding IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Predicted GO
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0005199 structural constituent of cell wall IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Predicted GO
BP GO:0009664 plant-type cell wall organization IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
BP GO:0071669 plant-type cell wall organization or biogenesis IEP Predicted GO
InterPro domains Description Start Stop
IPR004839 Aminotransferase_I/II 201 354
IPR004839 Aminotransferase_I/II 52 198
No external refs found!