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  5. Brara.D00002.1

Brara.D00002.1


Description : deubiquitinase *(OTU6-12)


Gene families : OG_42_0000871 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000871_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.D00002.1
Cluster HCAA Clusters: Cluster_165

Target Alias Description ECC score Gene Family Method Actions
LOC_Os04g32970 No alias OTU-like cysteine protease family protein, putative, expressed 0.02 Orthogroups_2024-Update
Potri.006G125900 No alias Cysteine proteinases superfamily protein 0.05 Orthogroups_2024-Update
Pp1s12_346V6 No alias F21E1.170; expressed protein [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Predicted GO
MF GO:0005375 copper ion transmembrane transporter activity IEP Predicted GO
BP GO:0006825 copper ion transport IEP Predicted GO
BP GO:0008037 cell recognition IEP Predicted GO
BP GO:0009606 tropism IEP Predicted GO
BP GO:0010274 hydrotropism IEP Predicted GO
BP GO:0022414 reproductive process IEP Predicted GO
BP GO:0035434 copper ion transmembrane transport IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Predicted GO
BP GO:0048544 recognition of pollen IEP Predicted GO
MF GO:0070403 NAD+ binding IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!