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  5. Brara.D00047.1

Brara.D00047.1


Description : mTERF-type transcription factor


Gene families : OG_42_0000078 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000078_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.D00047.1
Cluster HCAA Clusters: Cluster_279

Target Alias Description ECC score Gene Family Method Actions
HORVU7Hr1G040960.3 No alias mTERF-type transcription factor 0.03 Orthogroups_2024-Update
PSME_00000445-RA No alias (at5g64950 : 86.7) Mitochondrial transcription... 0.02 Orthogroups_2024-Update
PSME_00030142-RA No alias (at5g64950 : 89.4) Mitochondrial transcription... 0.03 Orthogroups_2024-Update
PSME_00053051-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00056046-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00056135-RA No alias (at1g79220 : 100.0) Mitochondrial transcription... 0.02 Orthogroups_2024-Update
PSME_00056194-RA No alias (at5g64950 : 106.0) Mitochondrial transcription... 0.04 Orthogroups_2024-Update
PSME_00056620-RA No alias (at1g79220 : 139.0) Mitochondrial transcription... 0.07 Orthogroups_2024-Update
Potri.001G035200 No alias Mitochondrial transcription termination factor family protein 0.03 Orthogroups_2024-Update
Seita.4G096000.1 No alias mTERF-type transcription factor 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEA 16Dec
BP GO:0006355 regulation of transcription, DNA-templated IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004176 ATP-dependent peptidase activity IEP Predicted GO
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
MF GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity IEP Predicted GO
MF GO:0004560 alpha-L-fucosidase activity IEP Predicted GO
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
BP GO:0009311 oligosaccharide metabolic process IEP Predicted GO
MF GO:0015928 fucosidase activity IEP Predicted GO
MF GO:0016157 sucrose synthase activity IEP Predicted GO
MF GO:0016409 palmitoyltransferase activity IEP Predicted GO
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Predicted GO
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0035251 UDP-glucosyltransferase activity IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
InterPro domains Description Start Stop
IPR003690 MTERF 197 362
IPR003690 MTERF 93 245
No external refs found!