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Description : component *(eL8) of large ribosomal-subunit (LSU) proteome
Gene families : OG_42_0001648 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001648_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa: Brara.D00049.1 | |
| Cluster | HCAA Clusters: Cluster_10 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| 270545 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.15 | Orthogroups_2024-Update | |
| A4A49_61918 | No alias | 60s ribosomal protein l7a-2 | 0.09 | Orthogroups_2024-Update | |
| At2g47610 | No alias | 60S ribosomal protein L7a-1... | 0.09 | Orthogroups_2024-Update | |
| At3g62870 | No alias | 60S ribosomal protein L7a-2... | 0.03 | Orthogroups_2024-Update | |
| Bradi4g34750 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.22 | Orthogroups_2024-Update | |
| Bradi5g24680 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.29 | Orthogroups_2024-Update | |
| Brara.C02368.1 | No alias | component *(eL8) of large ribosomal-subunit (LSU) proteome | 0.15 | Orthogroups_2024-Update | |
| Brara.E00034.1 | No alias | component *(eL8) of large ribosomal-subunit (LSU) proteome | 0.2 | Orthogroups_2024-Update | |
| Cre12.g529651 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.24 | Orthogroups_2024-Update | |
| GRMZM2G178968 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.15 | Orthogroups_2024-Update | |
| GRMZM5G870752 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.17 | Orthogroups_2024-Update | |
| Glyma.02G002800 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.2 | Orthogroups_2024-Update | |
| Glyma.10G006200 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.28 | Orthogroups_2024-Update | |
| Glyma.11G103700 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.19 | Orthogroups_2024-Update | |
| Glyma.12G028500 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.08 | Orthogroups_2024-Update | |
| HORVU5Hr1G076700.2 | No alias | component *(eL8) of large ribosomal-subunit (LSU) proteome | 0.17 | Orthogroups_2024-Update | |
| HORVU7Hr1G054670.1 | No alias | component *(eL8) of large ribosomal-subunit (LSU) proteome | 0.08 | Orthogroups_2024-Update | |
| Kfl00122_0060 | kfl00122_0060_v1.1 | (p35685|rl7a_orysa : 414.0) 60S ribosomal protein L7a -... | 0.11 | Orthogroups_2024-Update | |
| MA_109678g0010 | No alias | (p35685|rl7a_orysa : 335.0) 60S ribosomal protein L7a -... | 0.15 | Orthogroups_2024-Update | |
| Mp2g23250.1 | No alias | component RPL7a of LSU proteome component | 0.15 | Orthogroups_2024-Update | |
| Mp8g17650.1 | No alias | component RPL7a of LSU proteome component | 0.11 | Orthogroups_2024-Update | |
| PSME_00011086-RA | No alias | (p35685|rl7a_orysa : 336.0) 60S ribosomal protein L7a -... | 0.1 | Orthogroups_2024-Update | |
| Potri.004G113800 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.04 | Orthogroups_2024-Update | |
| Pp1s149_30V6 | No alias | 60s ribosomal protein l7a | 0.06 | Orthogroups_2024-Update | |
| Pp1s149_35V6 | No alias | 60s ribosomal protein l7a | 0.16 | Orthogroups_2024-Update | |
| Pp1s211_31V6 | No alias | 60s ribosomal protein l7a | 0.34 | Orthogroups_2024-Update | |
| Pp1s37_336V6 | No alias | 60s ribosomal protein l7a | 0.02 | Orthogroups_2024-Update | |
| Pp1s37_339V6 | No alias | 60s ribosomal protein l7a | 0.08 | Orthogroups_2024-Update | |
| Pp1s90_23V6 | No alias | 60s ribosomal protein l7a | 0.03 | Orthogroups_2024-Update | |
| Seita.2G267400.1 | No alias | component *(eL8) of large ribosomal-subunit (LSU) proteome | 0.27 | Orthogroups_2024-Update | |
| Seita.4G177300.1 | No alias | component *(eL8) of large ribosomal-subunit (LSU) proteome | 0.09 | Orthogroups_2024-Update | |
| Seita.6G224900.1 | No alias | component *(eL8) of large ribosomal-subunit (LSU) proteome | 0.33 | Orthogroups_2024-Update | |
| Sobic.002G258800.1 | No alias | component *(eL8) of large ribosomal-subunit (LSU) proteome | 0.33 | Orthogroups_2024-Update | |
| Sobic.002G259000.1 | No alias | component *(eL8) of large ribosomal-subunit (LSU) proteome | 0.13 | Orthogroups_2024-Update | |
| Solyc01g097760 | No alias | 60S ribosomal protein L7A-like protein (AHRD V3.3 ***... | 0.31 | Orthogroups_2024-Update | |
| Solyc06g050120 | No alias | 60S ribosomal protein L7A-like (AHRD V3.3 *** Q2VCI3_SOLTU) | 0.13 | Orthogroups_2024-Update | |
| Solyc06g064470 | No alias | 60S ribosomal protein L7A-like protein (AHRD V3.3 ***... | 0.35 | Orthogroups_2024-Update | |
| Sopen01g041360 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family | 0.29 | Orthogroups_2024-Update | |
| Sopen06g015510 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family | 0.19 | Orthogroups_2024-Update | |
| Sopen06g022940 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family | 0.14 | Orthogroups_2024-Update | |
| evm.model.contig_3485.8 | No alias | (p35685|rl7a_orysa : 308.0) 60S ribosomal protein L7a -... | 0.4 | Orthogroups_2024-Update | |
| evm.model.tig00000128.22 | No alias | (p35685|rl7a_orysa : 240.0) 60S ribosomal protein L7a -... | 0.11 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0001882 | nucleoside binding | IEP | Predicted GO |
| MF | GO:0001883 | purine nucleoside binding | IEP | Predicted GO |
| MF | GO:0003674 | molecular_function | IEP | Predicted GO |
| MF | GO:0003676 | nucleic acid binding | IEP | Predicted GO |
| MF | GO:0003723 | RNA binding | IEP | Predicted GO |
| MF | GO:0003735 | structural constituent of ribosome | IEP | Predicted GO |
| MF | GO:0003746 | translation elongation factor activity | IEP | Predicted GO |
| MF | GO:0003924 | GTPase activity | IEP | Predicted GO |
| MF | GO:0004017 | adenylate kinase activity | IEP | Predicted GO |
| MF | GO:0004018 | N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity | IEP | Predicted GO |
| MF | GO:0005198 | structural molecule activity | IEP | Predicted GO |
| MF | GO:0005525 | GTP binding | IEP | Predicted GO |
| CC | GO:0005575 | cellular_component | IEP | Predicted GO |
| CC | GO:0005840 | ribosome | IEP | Predicted GO |
| BP | GO:0006188 | IMP biosynthetic process | IEP | Predicted GO |
| BP | GO:0006412 | translation | IEP | Predicted GO |
| BP | GO:0006414 | translational elongation | IEP | Predicted GO |
| BP | GO:0006518 | peptide metabolic process | IEP | Predicted GO |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Predicted GO |
| MF | GO:0008097 | 5S rRNA binding | IEP | Predicted GO |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | Predicted GO |
| BP | GO:0008150 | biological_process | IEP | Predicted GO |
| BP | GO:0008152 | metabolic process | IEP | Predicted GO |
| BP | GO:0009058 | biosynthetic process | IEP | Predicted GO |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | Predicted GO |
| BP | GO:0009987 | cellular process | IEP | Predicted GO |
| MF | GO:0016776 | phosphotransferase activity, phosphate group as acceptor | IEP | Predicted GO |
| MF | GO:0016842 | amidine-lyase activity | IEP | Predicted GO |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | Predicted GO |
| MF | GO:0019205 | nucleobase-containing compound kinase activity | IEP | Predicted GO |
| BP | GO:0019538 | protein metabolic process | IEP | Predicted GO |
| MF | GO:0019843 | rRNA binding | IEP | Predicted GO |
| MF | GO:0019899 | enzyme binding | IEP | Predicted GO |
| MF | GO:0031267 | small GTPase binding | IEP | Predicted GO |
| MF | GO:0032549 | ribonucleoside binding | IEP | Predicted GO |
| MF | GO:0032550 | purine ribonucleoside binding | IEP | Predicted GO |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Predicted GO |
| CC | GO:0032991 | protein-containing complex | IEP | Predicted GO |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Predicted GO |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Predicted GO |
| BP | GO:0043043 | peptide biosynthetic process | IEP | Predicted GO |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Predicted GO |
| CC | GO:0043226 | organelle | IEP | Predicted GO |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | Predicted GO |
| CC | GO:0043229 | intracellular organelle | IEP | Predicted GO |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Predicted GO |
| BP | GO:0043603 | cellular amide metabolic process | IEP | Predicted GO |
| BP | GO:0043604 | amide biosynthetic process | IEP | Predicted GO |
| BP | GO:0044237 | cellular metabolic process | IEP | Predicted GO |
| BP | GO:0044238 | primary metabolic process | IEP | Predicted GO |
| BP | GO:0044249 | cellular biosynthetic process | IEP | Predicted GO |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Predicted GO |
| BP | GO:0044267 | cellular protein metabolic process | IEP | Predicted GO |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Predicted GO |
| CC | GO:0044424 | intracellular part | IEP | Predicted GO |
| CC | GO:0044444 | cytoplasmic part | IEP | Predicted GO |
| CC | GO:0044464 | cell part | IEP | Predicted GO |
| BP | GO:0046040 | IMP metabolic process | IEP | Predicted GO |
| MF | GO:0050145 | nucleoside monophosphate kinase activity | IEP | Predicted GO |
| MF | GO:0051020 | GTPase binding | IEP | Predicted GO |
| BP | GO:0071704 | organic substance metabolic process | IEP | Predicted GO |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Predicted GO |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Predicted GO |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | Predicted GO |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004038 | Ribosomal_L7Ae/L30e/S12e/Gad45 | 113 | 202 |
| No external refs found! |