Description : ARF-type transcription factor
Gene families : OG_42_0000050 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000050_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Brassica rapa: Brara.D00084.1 | |
Cluster | HCAA Clusters: Cluster_320 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
A4A49_18499 | No alias | auxin response factor 19 | 0.03 | Orthogroups_2024-Update | |
At1g19850 | No alias | Auxin response factor [Source:UniProtKB/TrEMBL;Acc:A0A178W993] | 0.04 | Orthogroups_2024-Update | |
Bradi3g28950 | No alias | auxin response factor 16 | 0.03 | Orthogroups_2024-Update | |
Brara.F01355.1 | No alias | ARF-type transcription factor & auxin signal mediator... | 0.06 | Orthogroups_2024-Update | |
Brara.F01415.1 | No alias | ARF-type transcription factor | 0.03 | Orthogroups_2024-Update | |
Brara.G02608.1 | No alias | ARF-type transcription factor | 0.07 | Orthogroups_2024-Update | |
GRMZM2G034840 | No alias | Transcriptional factor B3 family protein /... | 0.03 | Orthogroups_2024-Update | |
GRMZM2G081406 | No alias | auxin response factor 16 | 0.04 | Orthogroups_2024-Update | |
Glyma.06G265460 | No alias | auxin response factor 6 | 0.03 | Orthogroups_2024-Update | |
Glyma.15G091000 | No alias | auxin response factor 8 | 0.04 | Orthogroups_2024-Update | |
Glyma.17G047100 | No alias | Transcriptional factor B3 family protein /... | 0.04 | Orthogroups_2024-Update | |
LOC_Os01g70270 | No alias | auxin response factor, putative, expressed | 0.03 | Orthogroups_2024-Update | |
LOC_Os02g35140 | No alias | auxin response factor 7, putative, expressed | 0.03 | Orthogroups_2024-Update | |
LOC_Os04g36054 | No alias | auxin response factor 9, putative, expressed | 0.03 | Orthogroups_2024-Update | |
LOC_Os12g41950 | No alias | auxin response factor, putative, expressed | 0.03 | Orthogroups_2024-Update | |
Mp4g11820.1 | No alias | transcription factor (ARF) | 0.02 | Orthogroups_2024-Update | |
PSME_00035831-RA | No alias | (at4g30080 : 162.0) Involved in root cap cell... | 0.02 | Orthogroups_2024-Update | |
PSME_00045746-RA | No alias | (at4g30080 : 87.8) Involved in root cap cell... | 0.02 | Orthogroups_2024-Update | |
Seita.3G020000.1 | No alias | ARF-type transcription factor | 0.02 | Orthogroups_2024-Update | |
Seita.3G147000.1 | No alias | ARF-type transcription factor | 0.02 | Orthogroups_2024-Update | |
Sobic.006G255300.1 | No alias | ARF-type transcription factor | 0.03 | Orthogroups_2024-Update | |
Solyc04g081240 | No alias | No description available | 0.04 | Orthogroups_2024-Update | |
Solyc07g043620 | No alias | Auxin Response Factor 6B | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | 16Dec |
CC | GO:0005634 | nucleus | IEA | 16Dec |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | 16Dec |
BP | GO:0009725 | response to hormone | IEA | 16Dec |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003896 | DNA primase activity | IEP | Predicted GO |
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | Predicted GO |
MF | GO:0004518 | nuclease activity | IEP | Predicted GO |
MF | GO:0004527 | exonuclease activity | IEP | Predicted GO |
BP | GO:0005996 | monosaccharide metabolic process | IEP | Predicted GO |
BP | GO:0006269 | DNA replication, synthesis of RNA primer | IEP | Predicted GO |
MF | GO:0008092 | cytoskeletal protein binding | IEP | Predicted GO |
MF | GO:0008171 | O-methyltransferase activity | IEP | Predicted GO |
MF | GO:0008408 | 3'-5' exonuclease activity | IEP | Predicted GO |
MF | GO:0015631 | tubulin binding | IEP | Predicted GO |
MF | GO:0016740 | transferase activity | IEP | Predicted GO |
BP | GO:0019321 | pentose metabolic process | IEP | Predicted GO |
BP | GO:0019566 | arabinose metabolic process | IEP | Predicted GO |
MF | GO:0043015 | gamma-tubulin binding | IEP | Predicted GO |
BP | GO:0043248 | proteasome assembly | IEP | Predicted GO |
BP | GO:0046373 | L-arabinose metabolic process | IEP | Predicted GO |
MF | GO:0046556 | alpha-L-arabinofuranosidase activity | IEP | Predicted GO |
MF | GO:0046983 | protein dimerization activity | IEP | Predicted GO |
No external refs found! |