Brara.D00105.1

Description : plasma membrane intrinsic protein *(PIP)

Gene families : OG_42_0000132 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000132_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.D00105.1
Cluster	HCAA Clusters: Cluster_241

Target	Alias	Description	ECC score	Gene Family Method
A4A49_01362	No alias	aquaporin pip2-3	0.05	Orthogroups_2024-Update
A4A49_59551	No alias	putative aquaporin pip2-5	0.03	Orthogroups_2024-Update
A4A49_64458	No alias	putative aquaporin pip2-1	0.04	Orthogroups_2024-Update
Glyma.12G172500	No alias	plasma membrane intrinsic protein 2	0.03	Orthogroups_2024-Update
HORVU6Hr1G092970.3	No alias	plasma membrane intrinsic protein *(PIP)	0.02	Orthogroups_2024-Update
Sobic.002G125200.1	No alias	plasma membrane intrinsic protein *(PIP)	0.03	Orthogroups_2024-Update
Sobic.006G150100.1	No alias	plasma membrane intrinsic protein *(PIP)	0.03	Orthogroups_2024-Update
Solyc08g081190	No alias	plasma membrane intrinsic protein 1.5	0.03	Orthogroups_2024-Update
Solyc10g084120	No alias	plasma membrane intrinsic protein 2.5	0.03	Orthogroups_2024-Update
Sopen01g053700	No alias	Major intrinsic protein	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0015267	channel activity	IEA	16Dec
CC	GO:0016020	membrane	IEA	16Dec
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	16Dec

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Type	GO Term	Name	Evidence	Source
MF	GO:0003729	mRNA binding	IEP	Predicted GO
MF	GO:0003873	6-phosphofructo-2-kinase activity	IEP	Predicted GO
MF	GO:0005542	folic acid binding	IEP	Predicted GO
CC	GO:0005685	U1 snRNP	IEP	Predicted GO
BP	GO:0006000	fructose metabolic process	IEP	Predicted GO
BP	GO:0006376	mRNA splice site selection	IEP	Predicted GO
BP	GO:0006801	superoxide metabolic process	IEP	Predicted GO
MF	GO:0008107	galactoside 2-alpha-L-fucosyltransferase activity	IEP	Predicted GO
MF	GO:0008417	fucosyltransferase activity	IEP	Predicted GO
MF	GO:0008443	phosphofructokinase activity	IEP	Predicted GO
MF	GO:0016301	kinase activity	IEP	Predicted GO
MF	GO:0016740	transferase activity	IEP	Predicted GO
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Predicted GO
MF	GO:0019200	carbohydrate kinase activity	IEP	Predicted GO
BP	GO:0022618	ribonucleoprotein complex assembly	IEP	Predicted GO
CC	GO:0030532	small nuclear ribonucleoprotein complex	IEP	Predicted GO
MF	GO:0031127	alpha-(1,2)-fucosyltransferase activity	IEP	Predicted GO
MF	GO:0031406	carboxylic acid binding	IEP	Predicted GO
MF	GO:0042393	histone binding	IEP	Predicted GO
BP	GO:0042546	cell wall biogenesis	IEP	Predicted GO
MF	GO:0043177	organic acid binding	IEP	Predicted GO
MF	GO:0051287	NAD binding	IEP	Predicted GO
BP	GO:0071826	ribonucleoprotein complex subunit organization	IEP	Predicted GO
MF	GO:0072341	modified amino acid binding	IEP	Predicted GO
BP	GO:0072593	reactive oxygen species metabolic process	IEP	Predicted GO
CC	GO:0097525	spliceosomal snRNP complex	IEP	Predicted GO
CC	GO:0120114	Sm-like protein family complex	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000425	MIP	44	271

External Links

No external refs found!

Brara.D00105.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation