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  5. Brara.D00328.1

Brara.D00328.1


Description : calcium sensor *(CML) & calcium sensor *(CaM)


Gene families : OG_42_0000315 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000315_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.D00328.1
Cluster HCAA Clusters: Cluster_125

Target Alias Description ECC score Gene Family Method Actions
Bradi2g21460 No alias calmodulin 5 0.03 Orthogroups_2024-Update
GRMZM2G029107 No alias calmodulin 5 0.02 Orthogroups_2024-Update
GRMZM2G044963 No alias calmodulin 5 0.03 Orthogroups_2024-Update
LOC_Os11g03980 No alias OsCML2 - Calmodulin-related calcium sensor protein, expressed 0.03 Orthogroups_2024-Update
MA_437839g0010 No alias (at5g21274 : 142.0) Encodes a calmodulin isoform.... 0.03 Orthogroups_2024-Update
Potri.016G024700 No alias calmodulin 5 0.02 Orthogroups_2024-Update
Pp1s40_127V6 No alias calmodulin 0.02 Orthogroups_2024-Update
Seita.5G354700.1 No alias calcium sensor *(CML) & calcium sensor *(CaM) 0.02 Orthogroups_2024-Update
Sopen10g028690 No alias EF hand 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004427 inorganic diphosphatase activity IEP Predicted GO
MF GO:0004556 alpha-amylase activity IEP Predicted GO
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
BP GO:0043631 RNA polyadenylation IEP Predicted GO
MF GO:0070566 adenylyltransferase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 12 73
IPR002048 EF_hand_dom 83 146
No external refs found!