1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.D00329.1

Brara.D00329.1


Description : bHLH-type transcription factor


Gene families : OG_42_0000444 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000444_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.D00329.1
Cluster HCAA Clusters: Cluster_297

Target Alias Description ECC score Gene Family Method Actions
Brara.C02063.1 No alias bHLH-type transcription factor 0.03 Orthogroups_2024-Update
Glyma.01G088300 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.07G205800 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.13G291400 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.19G128900 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
HORVU3Hr1G027630.3 No alias bHLH-type transcription factor 0.04 Orthogroups_2024-Update
Seita.2G235400.1 No alias bHLH-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.002G198500.1 No alias bHLH-type transcription factor 0.04 Orthogroups_2024-Update
Sobic.007G135900.1 No alias component *(TMO5) of TMO5-LHW cytokinin control complex... 0.02 Orthogroups_2024-Update
Solyc03g095980 No alias bHLH transcription factor 021 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0004363 glutathione synthase activity IEP Predicted GO
BP GO:0006366 transcription by RNA polymerase II IEP Predicted GO
BP GO:0006575 cellular modified amino acid metabolic process IEP Predicted GO
BP GO:0006749 glutathione metabolic process IEP Predicted GO
BP GO:0006750 glutathione biosynthetic process IEP Predicted GO
BP GO:0007275 multicellular organism development IEP Predicted GO
MF GO:0016881 acid-amino acid ligase activity IEP Predicted GO
BP GO:0019184 nonribosomal peptide biosynthetic process IEP Predicted GO
BP GO:0032501 multicellular organismal process IEP Predicted GO
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Predicted GO
BP GO:0044272 sulfur compound biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR011598 bHLH_dom 53 98
No external refs found!