Brara.D00407.1

Description : protein involved in PS-II repair *(PPL1)

Gene families : OG_42_0003179 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003179_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.D00407.1
Cluster	HCAA Clusters: Cluster_293

Target	Alias	Description	ECC score	Gene Family Method
Seita.9G449200.1	No alias	component *(PnsL1) of NDH lumen subcomplex L	0.02	Orthogroups_2024-Update
Seita.9G561800.1	No alias	protein involved in PS-II repair *(PPL1)	0.03	Orthogroups_2024-Update
Sopen10g024330	No alias	PsbP	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005509	calcium ion binding	IEA	16Dec
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
CC	GO:0009521	photosystem	None	Extended
CC	GO:0009523	photosystem II	IEA	16Dec
CC	GO:0009654	photosystem II oxygen evolving complex	IEA	16Dec
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015979	photosynthesis	IEA	16Dec
CC	GO:0019898	extrinsic component of membrane	IEA	16Dec
CC	GO:0032991	protein-containing complex	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044425	membrane part	None	Extended
CC	GO:0044436	thylakoid part	None	Extended
CC	GO:0044464	cell part	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1990204	oxidoreductase complex	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006066	alcohol metabolic process	IEP	Predicted GO
BP	GO:0006694	steroid biosynthetic process	IEP	Predicted GO
BP	GO:0006729	tetrahydrobiopterin biosynthetic process	IEP	Predicted GO
MF	GO:0008124	4-alpha-hydroxytetrahydrobiopterin dehydratase activity	IEP	Predicted GO
BP	GO:0008202	steroid metabolic process	IEP	Predicted GO
BP	GO:0008610	lipid biosynthetic process	IEP	Predicted GO
BP	GO:0019751	polyol metabolic process	IEP	Predicted GO
BP	GO:0034311	diol metabolic process	IEP	Predicted GO
BP	GO:0034312	diol biosynthetic process	IEP	Predicted GO
BP	GO:0042558	pteridine-containing compound metabolic process	IEP	Predicted GO
BP	GO:0042559	pteridine-containing compound biosynthetic process	IEP	Predicted GO
BP	GO:0044283	small molecule biosynthetic process	IEP	Predicted GO
BP	GO:0046146	tetrahydrobiopterin metabolic process	IEP	Predicted GO
BP	GO:0046165	alcohol biosynthetic process	IEP	Predicted GO
BP	GO:0046173	polyol biosynthetic process	IEP	Predicted GO
BP	GO:1901617	organic hydroxy compound biosynthetic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR002683	PsbP	79	227

External Links

No external refs found!