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  5. Brara.D00434.1

Brara.D00434.1


Description : Unknown function


Gene families : OG_42_0000348 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000348_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.D00434.1
Cluster HCAA Clusters: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G000620 No alias S-locus lectin protein kinase family protein 0.02 Orthogroups_2024-Update
Potri.001G414000 No alias S-locus lectin protein kinase family protein 0.03 Orthogroups_2024-Update
Seita.7G252500.1 No alias SD-1 protein kinase & EC_2.7 transferase transferring... 0.03 Orthogroups_2024-Update
Sobic.006G229500.1 No alias SD-1 protein kinase & EC_2.7 transferase transferring... 0.03 Orthogroups_2024-Update
Solyc04g077270 No alias Serine/threonine-protein kinase (AHRD V3.3 *** M1A1I5_SOLTU) 0.03 Orthogroups_2024-Update
Solyc04g077360 No alias Serine/threonine-protein kinase (AHRD V3.3 *** M1A1I5_SOLTU) 0.03 Orthogroups_2024-Update
Solyc07g063720 No alias Serine/threonine-protein kinase (AHRD V3.3 *** M1CC72_SOLTU) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0048544 recognition of pollen IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP Predicted GO
BP GO:0002682 regulation of immune system process IEP Predicted GO
BP GO:0002831 regulation of response to biotic stimulus IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
BP GO:0009452 7-methylguanosine RNA capping IEP Predicted GO
BP GO:0010112 regulation of systemic acquired resistance IEP Predicted GO
BP GO:0031347 regulation of defense response IEP Predicted GO
BP GO:0032101 regulation of response to external stimulus IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0036260 RNA capping IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
BP GO:0043900 regulation of multi-organism process IEP Predicted GO
BP GO:0045088 regulation of innate immune response IEP Predicted GO
BP GO:0048583 regulation of response to stimulus IEP Predicted GO
BP GO:0050776 regulation of immune response IEP Predicted GO
BP GO:0080134 regulation of response to stress IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000858 S_locus_glycoprot_dom 227 304
IPR001480 Bulb-type_lectin_dom 82 184
IPR003609 Pan_app 326 386
No external refs found!