1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.D00470.1

Brara.D00470.1


Description : A1-class (Pepsin) protease


Gene families : OG_42_0002373 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002373_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.D00470.1
Cluster HCAA Clusters: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
At1g09750 No alias Aspartyl protease AED3 [Source:UniProtKB/Swiss-Prot;Acc:O04496] 0.04 Orthogroups_2024-Update
Potri.001G028200 No alias Eukaryotic aspartyl protease family protein 0.05 Orthogroups_2024-Update
Potri.002G104600 No alias Eukaryotic aspartyl protease family protein 0.03 Orthogroups_2024-Update
Solyc01g096450 No alias Aspartic proteinase nepenthesin-1-like protein (AHRD... 0.03 Orthogroups_2024-Update
Sopen01g040180 No alias Xylanase inhibitor C-terminal 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0004190 aspartic-type endopeptidase activity IEP Predicted GO
MF GO:0004576 oligosaccharyl transferase activity IEP Predicted GO
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
BP GO:0006099 tricarboxylic acid cycle IEP Predicted GO
BP GO:0006101 citrate metabolic process IEP Predicted GO
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
BP GO:0015977 carbon fixation IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
BP GO:0016999 antibiotic metabolic process IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
CC GO:0030126 COPI vesicle coat IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
MF GO:0070001 aspartic-type peptidase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR032799 TAXi_C 276 424
IPR032861 TAXi_N 92 253
No external refs found!