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  5. Brara.D00474.1

Brara.D00474.1


Description : R-type VAMP7-group component of SNARE longin membrane fusion complex


Gene families : OG_42_0000264 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000264_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.D00474.1
Cluster HCAA Clusters: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
At1g04760 No alias Putative vesicle-associated membrane protein 726... 0.04 Orthogroups_2024-Update
At2g25340 No alias VAMP712 [Source:UniProtKB/TrEMBL;Acc:A0A178VTB3] 0.03 Orthogroups_2024-Update
At4g15780 No alias vesicle-associated membrane protein 724... 0.03 Orthogroups_2024-Update
Brara.H01322.1 No alias R-type VAMP7-group component of SNARE longin membrane... 0.03 Orthogroups_2024-Update
GRMZM2G008919 No alias vesicle-associated membrane protein 726 0.02 Orthogroups_2024-Update
GRMZM2G104505 No alias vesicle-associated membrane protein 726 0.03 Orthogroups_2024-Update
GRMZM5G846196 No alias vesicle-associated membrane protein 713 0.03 Orthogroups_2024-Update
Glyma.20G076200 No alias vesicle-associated membrane protein 726 0.04 Orthogroups_2024-Update
Potri.009G018900 No alias vesicle-associated membrane protein 714 0.03 Orthogroups_2024-Update
Potri.010G239900 No alias vesicle-associated membrane protein 727 0.03 Orthogroups_2024-Update
Potri.015G118300 No alias vesicle-associated membrane protein 726 0.04 Orthogroups_2024-Update
Sobic.010G058500.2 No alias R-type VAMP7-group component of SNARE longin membrane... 0.02 Orthogroups_2024-Update
Solyc02g069150 No alias Vesicle-associated membrane protein, putative (AHRD V3.3... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0008104 protein localization IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
BP GO:0015031 protein transport IEP Predicted GO
BP GO:0015833 peptide transport IEP Predicted GO
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
BP GO:0033036 macromolecule localization IEP Predicted GO
BP GO:0042886 amide transport IEP Predicted GO
BP GO:0045184 establishment of protein localization IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
InterPro domains Description Start Stop
IPR010908 Longin_dom 33 100
No external refs found!