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Description : actin filament protein
Gene families : OG_42_0000262 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000262_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa: Brara.D00512.1 | |
| Cluster | HCAA Clusters: Cluster_168 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Bradi2g24070 | No alias | actin 7 | 0.02 | Orthogroups_2024-Update | |
| Glyma.11G139800 | No alias | actin-11 | 0.03 | Orthogroups_2024-Update | |
| Glyma.12G063400 | No alias | actin-11 | 0.04 | Orthogroups_2024-Update | |
| LOC_Os01g64630 | No alias | actin, putative, expressed | 0.02 | Orthogroups_2024-Update | |
| Solyc04g011500 | No alias | actin | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000276 | mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) | IEP | Predicted GO |
| MF | GO:0004177 | aminopeptidase activity | IEP | Predicted GO |
| MF | GO:0004334 | fumarylacetoacetase activity | IEP | Predicted GO |
| MF | GO:0004751 | ribose-5-phosphate isomerase activity | IEP | Predicted GO |
| BP | GO:0006081 | cellular aldehyde metabolic process | IEP | Predicted GO |
| BP | GO:0007034 | vacuolar transport | IEP | Predicted GO |
| MF | GO:0008235 | metalloexopeptidase activity | IEP | Predicted GO |
| BP | GO:0009052 | pentose-phosphate shunt, non-oxidative branch | IEP | Predicted GO |
| BP | GO:0009892 | negative regulation of metabolic process | IEP | Predicted GO |
| BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | Predicted GO |
| BP | GO:0010629 | negative regulation of gene expression | IEP | Predicted GO |
| BP | GO:0016458 | gene silencing | IEP | Predicted GO |
| MF | GO:0016822 | hydrolase activity, acting on acid carbon-carbon bonds | IEP | Predicted GO |
| MF | GO:0016823 | hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances | IEP | Predicted GO |
| MF | GO:0016846 | carbon-sulfur lyase activity | IEP | Predicted GO |
| MF | GO:0016851 | magnesium chelatase activity | IEP | Predicted GO |
| MF | GO:0016860 | intramolecular oxidoreductase activity | IEP | Predicted GO |
| MF | GO:0016861 | intramolecular oxidoreductase activity, interconverting aldoses and ketoses | IEP | Predicted GO |
| BP | GO:0019682 | glyceraldehyde-3-phosphate metabolic process | IEP | Predicted GO |
| BP | GO:0019693 | ribose phosphate metabolic process | IEP | Predicted GO |
| BP | GO:0031047 | gene silencing by RNA | IEP | Predicted GO |
| CC | GO:0045263 | proton-transporting ATP synthase complex, coupling factor F(o) | IEP | Predicted GO |
| MF | GO:0046422 | violaxanthin de-epoxidase activity | IEP | Predicted GO |
| MF | GO:0051002 | ligase activity, forming nitrogen-metal bonds | IEP | Predicted GO |
| MF | GO:0051003 | ligase activity, forming nitrogen-metal bonds, forming coordination complexes | IEP | Predicted GO |
| MF | GO:0070006 | metalloaminopeptidase activity | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004000 | Actin | 5 | 377 |
| No external refs found! |