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Description : component *(CSN8) of COP9 signalosome complex
Gene families : OG_42_0005494 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005494_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa: Brara.D00668.1 | |
| Cluster | HCAA Clusters: Cluster_272 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Brara.H00696.1 | No alias | component *(CSN8) of COP9 signalosome complex | 0.03 | Orthogroups_2024-Update | |
| Potri.001G207900 | No alias | COP9 signalosome, subunit CSN8 | 0.03 | Orthogroups_2024-Update | |
| Pp1s79_113V6 | No alias | cop9 constitutive photomorphogenic homolog subunit 8 | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000139 | Golgi membrane | IEP | Predicted GO |
| BP | GO:0002097 | tRNA wobble base modification | IEP | Predicted GO |
| BP | GO:0002098 | tRNA wobble uridine modification | IEP | Predicted GO |
| MF | GO:0003697 | single-stranded DNA binding | IEP | Predicted GO |
| MF | GO:0003723 | RNA binding | IEP | Predicted GO |
| MF | GO:0003839 | gamma-glutamylcyclotransferase activity | IEP | Predicted GO |
| MF | GO:0005338 | nucleotide-sugar transmembrane transporter activity | IEP | Predicted GO |
| BP | GO:0006396 | RNA processing | IEP | Predicted GO |
| BP | GO:0006400 | tRNA modification | IEP | Predicted GO |
| BP | GO:0006575 | cellular modified amino acid metabolic process | IEP | Predicted GO |
| BP | GO:0006749 | glutathione metabolic process | IEP | Predicted GO |
| BP | GO:0006751 | glutathione catabolic process | IEP | Predicted GO |
| BP | GO:0006891 | intra-Golgi vesicle-mediated transport | IEP | Predicted GO |
| BP | GO:0008033 | tRNA processing | IEP | Predicted GO |
| MF | GO:0015165 | pyrimidine nucleotide-sugar transmembrane transporter activity | IEP | Predicted GO |
| BP | GO:0015780 | nucleotide-sugar transmembrane transport | IEP | Predicted GO |
| BP | GO:0015931 | nucleobase-containing compound transport | IEP | Predicted GO |
| MF | GO:0015932 | nucleobase-containing compound transmembrane transporter activity | IEP | Predicted GO |
| BP | GO:0016192 | vesicle-mediated transport | IEP | Predicted GO |
| MF | GO:0016842 | amidine-lyase activity | IEP | Predicted GO |
| CC | GO:0031090 | organelle membrane | IEP | Predicted GO |
| CC | GO:0033588 | Elongator holoenzyme complex | IEP | Predicted GO |
| BP | GO:0042219 | cellular modified amino acid catabolic process | IEP | Predicted GO |
| BP | GO:0043171 | peptide catabolic process | IEP | Predicted GO |
| BP | GO:0044273 | sulfur compound catabolic process | IEP | Predicted GO |
| CC | GO:0044431 | Golgi apparatus part | IEP | Predicted GO |
| BP | GO:0051187 | cofactor catabolic process | IEP | Predicted GO |
| BP | GO:0090481 | pyrimidine nucleotide-sugar transmembrane transport | IEP | Predicted GO |
| CC | GO:0098588 | bounding membrane of organelle | IEP | Predicted GO |
| BP | GO:1901264 | carbohydrate derivative transport | IEP | Predicted GO |
| MF | GO:1901505 | carbohydrate derivative transmembrane transporter activity | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR033464 | CSN8_PSD8_EIF3K | 38 | 176 |
| No external refs found! |