1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.D00719.1

Brara.D00719.1


Description : EC_2.4 glycosyltransferase & mannan synthase *(CSLA)


Gene families : OG_42_0000129 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000129_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.D00719.1
Cluster HCAA Clusters: Cluster_299

Target Alias Description ECC score Gene Family Method Actions
Brara.A00614.1 No alias 1,4-beta-glucan synthase *(CSLC) & EC_2.4 glycosyltransferase 0.03 Orthogroups_2024-Update
Brara.B03324.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.04G076500 No alias Cellulose-synthase-like C5 0.02 Orthogroups_2024-Update
Glyma.14G090000 No alias Cellulose-synthase-like C12 0.04 Orthogroups_2024-Update
Glyma.19G012700 No alias Cellulose-synthase-like C4 0.02 Orthogroups_2024-Update
Mp1g22770.1 No alias mannan synthase (CSLA) 0.02 Orthogroups_2024-Update
PSME_00046896-RA No alias (at4g07960 : 830.0) encodes a gene similar to cellulose... 0.02 Orthogroups_2024-Update
Pp1s162_130V6 No alias cellulose synthase-like glycosyltransferase family 2 0.02 Orthogroups_2024-Update
Seita.2G024400.1 No alias 1,4-beta-glucan synthase *(CSLC) & EC_2.4 glycosyltransferase 0.01 Orthogroups_2024-Update
Seita.5G331000.1 No alias 1,4-beta-glucan synthase *(CSLC) & EC_2.4 glycosyltransferase 0.03 Orthogroups_2024-Update
Sobic.003G308100.1 No alias 1,4-beta-glucan synthase *(CSLC) & EC_2.4 glycosyltransferase 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP Predicted GO
MF GO:0004356 glutamate-ammonia ligase activity IEP Predicted GO
MF GO:0004618 phosphoglycerate kinase activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0006541 glutamine metabolic process IEP Predicted GO
BP GO:0006542 glutamine biosynthetic process IEP Predicted GO
BP GO:0007030 Golgi organization IEP Predicted GO
BP GO:0009064 glutamine family amino acid metabolic process IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
MF GO:0016211 ammonia ligase activity IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Predicted GO
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Predicted GO
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Predicted GO
CC GO:0017053 transcriptional repressor complex IEP Predicted GO
CC GO:0070176 DRM complex IEP Predicted GO
CC GO:0072546 ER membrane protein complex IEP Predicted GO
CC GO:0090568 nuclear transcriptional repressor complex IEP Predicted GO
CC GO:0090571 RNA polymerase II transcription repressor complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001173 Glyco_trans_2-like 203 412
No external refs found!