1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.D00969.1

Brara.D00969.1


Description : Qb-type VTI-group component of SNARE membrane fusion complex


Gene families : OG_42_0001748 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001748_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.D00969.1
Cluster HCAA Clusters: Cluster_208

Target Alias Description ECC score Gene Family Method Actions
Bradi2g18180 No alias Vesicle transport v-SNARE family protein 0.04 Orthogroups_2024-Update
Cre13.g577500 No alias Vesicle transport v-SNARE family protein 0.02 Orthogroups_2024-Update
LOC_Os01g51120 No alias vesicle transport v-SNARE protein, putative, expressed 0.02 Orthogroups_2024-Update
Potri.010G164300 No alias Vesicle transport v-SNARE family protein 0.02 Orthogroups_2024-Update
Pp1s2_32V6 No alias vesicle transport v-snare protein 0.03 Orthogroups_2024-Update
Seita.5G205400.1 No alias Qb-type VTI-group component of SNARE membrane fusion complex 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
BP GO:0016197 endosomal transport IEP Predicted GO
BP GO:0016482 cytosolic transport IEP Predicted GO
CC GO:0030906 retromer, cargo-selective complex IEP Predicted GO
BP GO:0042147 retrograde transport, endosome to Golgi IEP Predicted GO
InterPro domains Description Start Stop
IPR007705 Vesicle_trsprt_v-SNARE_N 12 90
No external refs found!