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  5. Brara.D00978.1

Brara.D00978.1


Description : NAC-type transcription factor


Gene families : OG_42_0000017 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000017_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.D00978.1
Cluster HCAA Clusters: Cluster_342

Target Alias Description ECC score Gene Family Method Actions
A4A49_26375 No alias protein sombrero 0.03 Orthogroups_2024-Update
A4A49_37618 No alias nac domain-containing protein 86 0.04 Orthogroups_2024-Update
A4A49_58267 No alias hypothetical protein 0.04 Orthogroups_2024-Update
At1g79580 No alias Protein SOMBRERO [Source:UniProtKB/Swiss-Prot;Acc:Q9MA17] 0.03 Orthogroups_2024-Update
At3g04060 No alias NAC domain-containing protein 46... 0.03 Orthogroups_2024-Update
At3g18400 No alias NAC domain containing protein 58... 0.04 Orthogroups_2024-Update
At3g29035 No alias NAC domain-containing protein 59... 0.03 Orthogroups_2024-Update
At5g17260 No alias NAC domain-containing protein 86... 0.03 Orthogroups_2024-Update
At5g66300 No alias NAC domain-containing protein 105... 0.03 Orthogroups_2024-Update
Brara.B00259.1 No alias NAC-type transcription factor 0.03 Orthogroups_2024-Update
Brara.B00306.1 No alias NAC-type transcription factor 0.05 Orthogroups_2024-Update
Brara.B01634.1 No alias NAC-type transcription factor 0.05 Orthogroups_2024-Update
Brara.D01471.1 No alias NAC-type transcription factor 0.03 Orthogroups_2024-Update
Brara.H00641.1 No alias NAC-type transcription factor 0.03 Orthogroups_2024-Update
Brara.J01736.1 No alias NAC-type transcription factor 0.04 Orthogroups_2024-Update
GRMZM5G898290 No alias NAC domain containing protein 80 0.03 Orthogroups_2024-Update
Glyma.04G078600 No alias NAC domain containing protein 38 0.03 Orthogroups_2024-Update
Glyma.05G234200 No alias NAC domain containing protein 58 0.03 Orthogroups_2024-Update
Glyma.09G233600 No alias NAC domain containing protein 70 0.02 Orthogroups_2024-Update
Glyma.12G186851 No alias NTM1-like 8 0.03 Orthogroups_2024-Update
Glyma.16G019400 No alias NAC (No Apical Meristem) domain transcriptional... 0.04 Orthogroups_2024-Update
Glyma.16G152100 No alias Arabidopsis NAC domain containing protein 87 0.03 Orthogroups_2024-Update
HORVU5Hr1G045640.7 No alias NAC-type transcription factor 0.03 Orthogroups_2024-Update
LOC_Os02g15340 No alias no apical meristem protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os03g03540 No alias no apical meristem protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os06g01230 No alias no apical meristem protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g33940 No alias NAC domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g03050 No alias no apical meristem protein, putative, expressed 0.03 Orthogroups_2024-Update
PSME_00027653-RA No alias (at5g53950 : 285.0) Transcriptional activator of the NAC... 0.02 Orthogroups_2024-Update
Potri.012G001400 No alias NAC domain containing protein 100 0.03 Orthogroups_2024-Update
Potri.017G139500 No alias NAC domain containing protein 28 0.03 Orthogroups_2024-Update
Seita.2G436400.1 No alias NAC-type transcription factor 0.04 Orthogroups_2024-Update
Seita.6G003700.1 No alias NAC-type transcription factor 0.02 Orthogroups_2024-Update
Seita.7G124900.1 No alias NAC-type transcription factor 0.02 Orthogroups_2024-Update
Seita.9G417900.1 No alias NAC-type transcription factor 0.03 Orthogroups_2024-Update
Seita.9G564000.1 No alias NAC-type transcription factor 0.02 Orthogroups_2024-Update
Sobic.001G386000.1 No alias NAC-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.010G155000.2 No alias NAC-type transcription factor 0.02 Orthogroups_2024-Update
Solyc03g115850 No alias NAC domain-containing protein 0.03 Orthogroups_2024-Update
Solyc07g062840 No alias goblet 0.03 Orthogroups_2024-Update
Sopen05g033920 No alias No apical meristem (NAM) protein 0.03 Orthogroups_2024-Update
Sopen06g029400 No alias No apical meristem (NAM) protein 0.04 Orthogroups_2024-Update
Sopen07g031040 No alias No apical meristem (NAM) protein 0.03 Orthogroups_2024-Update
Sopen08g001990 No alias No apical meristem (NAM) protein 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
BP GO:0006355 regulation of transcription, DNA-templated IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004743 pyruvate kinase activity IEP Predicted GO
CC GO:0005758 mitochondrial intermembrane space IEP Predicted GO
CC GO:0005787 signal peptidase complex IEP Predicted GO
BP GO:0006465 signal peptide processing IEP Predicted GO
BP GO:0016485 protein processing IEP Predicted GO
MF GO:0016530 metallochaperone activity IEP Predicted GO
MF GO:0016531 copper chaperone activity IEP Predicted GO
MF GO:0030955 potassium ion binding IEP Predicted GO
MF GO:0031420 alkali metal ion binding IEP Predicted GO
CC GO:0031970 organelle envelope lumen IEP Predicted GO
CC GO:0031974 membrane-enclosed lumen IEP Predicted GO
CC GO:0043233 organelle lumen IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
CC GO:0070013 intracellular organelle lumen IEP Predicted GO
MF GO:0140104 molecular carrier activity IEP Predicted GO
CC GO:1905368 peptidase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR003441 NAC-dom 21 145
No external refs found!