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  5. Brara.D01013.1

Brara.D01013.1


Description : PLP-independent amino acid racemase


Gene families : OG_42_0002080 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002080_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.D01013.1
Cluster HCAA Clusters: Cluster_294

Target Alias Description ECC score Gene Family Method Actions
Glyma.02G148300 No alias Phenazine biosynthesis PhzC/PhzF protein 0.05 Orthogroups_2024-Update
Kfl01021_0040 kfl01021_0040_v1.1 (at1g03210 : 204.0) Phenazine biosynthesis PhzC/PhzF... 0.02 Orthogroups_2024-Update
Sobic.001G328000.1 No alias PLP-independent amino acid racemase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA 16Dec
BP GO:0009058 biosynthetic process IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004664 prephenate dehydratase activity IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
BP GO:0006558 L-phenylalanine metabolic process IEP Predicted GO
MF GO:0008374 O-acyltransferase activity IEP Predicted GO
BP GO:0009072 aromatic amino acid family metabolic process IEP Predicted GO
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Predicted GO
BP GO:0009094 L-phenylalanine biosynthetic process IEP Predicted GO
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016836 hydro-lyase activity IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Predicted GO
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR003719 Phenazine_PhzF 70 128
No external refs found!