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  5. Brara.D01062.1

Brara.D01062.1


Description : raffinose synthase


Gene families : OG_42_0000676 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000676_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.D01062.1
Cluster HCAA Clusters: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
A4A49_20430 No alias putative galactinol--sucrose galactosyltransferase 2 0.03 Orthogroups_2024-Update
GRMZM2G311756 No alias seed imbibition 2 0.03 Orthogroups_2024-Update
HORVU3Hr1G016430.3 No alias raffinose synthase 0.03 Orthogroups_2024-Update
Mp3g19770.1 No alias Probable galactinol--sucrose galactosyltransferase 2... 0.02 Orthogroups_2024-Update
PSME_00001319-RA No alias (at1g55740 : 564.0) seed imbibition 1 (SIP1); CONTAINS... 0.03 Orthogroups_2024-Update
Potri.006G052800 No alias seed imbibition 2 0.04 Orthogroups_2024-Update
Potri.007G123400 No alias Raffinose synthase family protein 0.04 Orthogroups_2024-Update
Sobic.003G052300.1 No alias raffinose synthase 0.02 Orthogroups_2024-Update
Sopen02g031260 No alias Raffinose synthase or seed imbibition protein Sip1 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Predicted GO
BP GO:0000097 sulfur amino acid biosynthetic process IEP Predicted GO
BP GO:0001101 response to acid chemical IEP Predicted GO
MF GO:0004176 ATP-dependent peptidase activity IEP Predicted GO
MF GO:0004506 squalene monooxygenase activity IEP Predicted GO
MF GO:0004602 glutathione peroxidase activity IEP Predicted GO
BP GO:0006534 cysteine metabolic process IEP Predicted GO
BP GO:0006535 cysteine biosynthetic process from serine IEP Predicted GO
BP GO:0006563 L-serine metabolic process IEP Predicted GO
MF GO:0009001 serine O-acetyltransferase activity IEP Predicted GO
BP GO:0009069 serine family amino acid metabolic process IEP Predicted GO
BP GO:0009070 serine family amino acid biosynthetic process IEP Predicted GO
BP GO:0009415 response to water IEP Predicted GO
BP GO:0009628 response to abiotic stimulus IEP Predicted GO
BP GO:0010035 response to inorganic substance IEP Predicted GO
MF GO:0016407 acetyltransferase activity IEP Predicted GO
MF GO:0016412 serine O-acyltransferase activity IEP Predicted GO
MF GO:0016413 O-acetyltransferase activity IEP Predicted GO
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
BP GO:0019344 cysteine biosynthetic process IEP Predicted GO
MF GO:0030151 molybdenum ion binding IEP Predicted GO
BP GO:0031179 peptide modification IEP Predicted GO
MF GO:0035673 oligopeptide transmembrane transporter activity IEP Predicted GO
MF GO:0042887 amide transmembrane transporter activity IEP Predicted GO
BP GO:0044272 sulfur compound biosynthetic process IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:1901700 response to oxygen-containing compound IEP Predicted GO
MF GO:1904680 peptide transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR008811 Glycosyl_hydrolases_36 26 761
No external refs found!