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  5. Brara.D01149.1

Brara.D01149.1


Description : effector receptor *(NLR)


Gene families : OG_42_0000010 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.D01149.1
Cluster HCAA Clusters: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
A4A49_29289 No alias tmv resistance protein n 0.03 Orthogroups_2024-Update
A4A49_29374 No alias tmv resistance protein n 0.03 Orthogroups_2024-Update
At1g56510 No alias Disease resistance protein ADR2... 0.03 Orthogroups_2024-Update
At3g04210 No alias At3g04210/T6K12_17 [Source:UniProtKB/TrEMBL;Acc:Q8H1N6] 0.03 Orthogroups_2024-Update
At3g44630 No alias Disease resistance protein (TIR-NBS-LRR class) family... 0.03 Orthogroups_2024-Update
At5g46270 No alias Disease resistance protein (TIR-NBS-LRR class) family... 0.04 Orthogroups_2024-Update
At5g48780 No alias Disease resistance protein (TIR-NBS class)... 0.03 Orthogroups_2024-Update
At5g58120 No alias Disease resistance protein (TIR-NBS-LRR class) family... 0.05 Orthogroups_2024-Update
Brara.B02905.1 No alias effector receptor *(NLR) 0.03 Orthogroups_2024-Update
Brara.C04586.1 No alias effector receptor *(NLR) 0.03 Orthogroups_2024-Update
Brara.D00526.1 No alias effector receptor *(NLR) 0.04 Orthogroups_2024-Update
Brara.H01783.1 No alias effector receptor *(NLR) 0.03 Orthogroups_2024-Update
Brara.J01729.1 No alias effector receptor *(NLR) 0.04 Orthogroups_2024-Update
Brara.J01787.1 No alias effector receptor *(NLR) 0.04 Orthogroups_2024-Update
Brara.K01524.1 No alias effector receptor *(NLR) 0.05 Orthogroups_2024-Update
Glyma.01G039000 No alias transmembrane receptors;ATP binding 0.02 Orthogroups_2024-Update
Glyma.06G259700 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Orthogroups_2024-Update
Glyma.06G259800 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Orthogroups_2024-Update
Glyma.10G184300 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.03 Orthogroups_2024-Update
Glyma.12G132000 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.03 Orthogroups_2024-Update
Glyma.15G160900 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 Orthogroups_2024-Update
Glyma.16G135200 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.05 Orthogroups_2024-Update
Glyma.16G137600 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.04 Orthogroups_2024-Update
Glyma.16G159100 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Orthogroups_2024-Update
Glyma.16G210600 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Orthogroups_2024-Update
Glyma.16G213900 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 Orthogroups_2024-Update
MA_286751g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
Potri.005G206400 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Orthogroups_2024-Update
Potri.015G043600 No alias transmembrane receptors;ATP binding 0.03 Orthogroups_2024-Update
Potri.017G011800 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.03 Orthogroups_2024-Update
Potri.019G070001 No alias disease resistance protein (TIR-NBS-LRR class) 0.04 Orthogroups_2024-Update
Potri.019G070350 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Orthogroups_2024-Update
Potri.019G070460 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.02 Orthogroups_2024-Update
Potri.T074200 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.03 Orthogroups_2024-Update
Potri.T077532 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.04 Orthogroups_2024-Update
Potri.T129400 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.05 Orthogroups_2024-Update
Solyc01g102850 No alias Disease resistance protein (TIR-NBS-LRR class) family... 0.03 Orthogroups_2024-Update
Solyc12g097000 No alias TIR-NBS-LRR class disease resistance protein (AHRD V3.3... 0.04 Orthogroups_2024-Update
Sopen01g044060 No alias NB-ARC domain 0.02 Orthogroups_2024-Update
Sopen12g032720 No alias Phloem protein 2 0.02 Orthogroups_2024-Update
Sopen12g032810 No alias TIR domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0007165 signal transduction IEA 16Dec
MF GO:0043531 ADP binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0000976 transcription regulatory region sequence-specific DNA binding IEP Predicted GO
MF GO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding IEP Predicted GO
MF GO:0001012 RNA polymerase II regulatory region DNA binding IEP Predicted GO
MF GO:0001067 regulatory region nucleic acid binding IEP Predicted GO
BP GO:0002376 immune system process IEP Predicted GO
MF GO:0004564 beta-fructofuranosidase activity IEP Predicted GO
BP GO:0006955 immune response IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
MF GO:0032422 purine-rich negative regulatory element binding IEP Predicted GO
MF GO:0035673 oligopeptide transmembrane transporter activity IEP Predicted GO
MF GO:0042887 amide transmembrane transporter activity IEP Predicted GO
MF GO:0044212 transcription regulatory region DNA binding IEP Predicted GO
BP GO:0045087 innate immune response IEP Predicted GO
MF GO:1904680 peptide transmembrane transporter activity IEP Predicted GO
MF GO:1990837 sequence-specific double-stranded DNA binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002182 NB-ARC 190 409
IPR000157 TIR_dom 11 185
IPR011713 Leu-rich_rpt_3 605 623
No external refs found!