1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.D01167.1

Brara.D01167.1


Description : Unknown function


Gene families : OG_42_0000504 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000504_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.D01167.1
Cluster HCAA Clusters: Cluster_399

Target Alias Description ECC score Gene Family Method Actions
At1g64260 No alias MuDR family transposase [Source:UniProtKB/TrEMBL;Acc:Q9C7V1] 0.04 Orthogroups_2024-Update
Brara.I01342.1 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os05g28120 No alias transposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
Solyc05g016080 No alias No description available 0.03 Orthogroups_2024-Update
Solyc06g050680 No alias No description available 0.05 Orthogroups_2024-Update
Solyc07g019600 No alias No description available 0.04 Orthogroups_2024-Update
Solyc07g042340 No alias No description available 0.05 Orthogroups_2024-Update
Solyc08g066380 No alias No description available 0.02 Orthogroups_2024-Update
Solyc11g020010 No alias No description available 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004356 glutamate-ammonia ligase activity IEP Predicted GO
BP GO:0006541 glutamine metabolic process IEP Predicted GO
BP GO:0006542 glutamine biosynthetic process IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
BP GO:0009064 glutamine family amino acid metabolic process IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
MF GO:0016211 ammonia ligase activity IEP Predicted GO
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Predicted GO
BP GO:0019915 lipid storage IEP Predicted GO
InterPro domains Description Start Stop
IPR007527 Znf_SWIM 541 583
No external refs found!