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  5. Brara.D01340.1

Brara.D01340.1


Description : Unknown function


Gene families : OG_42_0000608 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000608_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.D01340.1
Cluster HCAA Clusters: Cluster_270

Target Alias Description ECC score Gene Family Method Actions
At3g62430 No alias F-box protein At3g62430 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZP7] 0.04 Orthogroups_2024-Update
At3g62440 No alias SAF1 [Source:UniProtKB/TrEMBL;Acc:A0A178VA18] 0.03 Orthogroups_2024-Update
At4g13960 No alias F-box/RNI-like superfamily protein [Source:TAIR;Acc:AT4G13960] 0.04 Orthogroups_2024-Update
Brara.C04106.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.G01834.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.I04066.1 No alias Unknown function 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003997 acyl-CoA oxidase activity IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
CC GO:0005777 peroxisome IEP Predicted GO
BP GO:0006635 fatty acid beta-oxidation IEP Predicted GO
BP GO:0009062 fatty acid catabolic process IEP Predicted GO
BP GO:0016042 lipid catabolic process IEP Predicted GO
BP GO:0016054 organic acid catabolic process IEP Predicted GO
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Predicted GO
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Predicted GO
BP GO:0019395 fatty acid oxidation IEP Predicted GO
BP GO:0030258 lipid modification IEP Predicted GO
BP GO:0034440 lipid oxidation IEP Predicted GO
CC GO:0042579 microbody IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
BP GO:0044242 cellular lipid catabolic process IEP Predicted GO
BP GO:0044282 small molecule catabolic process IEP Predicted GO
BP GO:0046395 carboxylic acid catabolic process IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:0072329 monocarboxylic acid catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001810 F-box_dom 4 39
No external refs found!