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Description : LSU processome maturation factor *(REIL)
Gene families : OG_42_0004184 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004184_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa: Brara.D01476.1 | |
| Cluster | HCAA Clusters: Cluster_62 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cre17.g716400 | No alias | Zinc finger protein 622 | 0.02 | Orthogroups_2024-Update | |
| LOC_Os06g47840 | No alias | ZOS6-08 - C2H2 zinc finger protein, expressed | 0.03 | Orthogroups_2024-Update | |
| Seita.4G249700.1 | No alias | LSU processome maturation factor *(REIL) | 0.01 | Orthogroups_2024-Update | |
| Solyc08g006470 | No alias | Zinc finger protein (AHRD V3.3 *** A0A0B2RI16_GLYSO) | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | Predicted GO |
| MF | GO:0003723 | RNA binding | IEP | Predicted GO |
| MF | GO:0004478 | methionine adenosyltransferase activity | IEP | Predicted GO |
| MF | GO:0004609 | phosphatidylserine decarboxylase activity | IEP | Predicted GO |
| MF | GO:0004645 | phosphorylase activity | IEP | Predicted GO |
| CC | GO:0005634 | nucleus | IEP | Predicted GO |
| CC | GO:0005694 | chromosome | IEP | Predicted GO |
| BP | GO:0006556 | S-adenosylmethionine biosynthetic process | IEP | Predicted GO |
| MF | GO:0008184 | glycogen phosphorylase activity | IEP | Predicted GO |
| BP | GO:0010024 | phytochromobilin biosynthetic process | IEP | Predicted GO |
| BP | GO:0016571 | histone methylation | IEP | Predicted GO |
| MF | GO:0016636 | oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor | IEP | Predicted GO |
| BP | GO:0018022 | peptidyl-lysine methylation | IEP | Predicted GO |
| BP | GO:0034968 | histone lysine methylation | IEP | Predicted GO |
| CC | GO:0042575 | DNA polymerase complex | IEP | Predicted GO |
| CC | GO:0043227 | membrane-bounded organelle | IEP | Predicted GO |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Predicted GO |
| CC | GO:0043625 | delta DNA polymerase complex | IEP | Predicted GO |
| CC | GO:0044454 | nuclear chromosome part | IEP | Predicted GO |
| BP | GO:0046500 | S-adenosylmethionine metabolic process | IEP | Predicted GO |
| MF | GO:0050897 | cobalt ion binding | IEP | Predicted GO |
| BP | GO:0051188 | cofactor biosynthetic process | IEP | Predicted GO |
| BP | GO:0051202 | phytochromobilin metabolic process | IEP | Predicted GO |
| BP | GO:0051382 | kinetochore assembly | IEP | Predicted GO |
| BP | GO:0051383 | kinetochore organization | IEP | Predicted GO |
| CC | GO:0061695 | transferase complex, transferring phosphorus-containing groups | IEP | Predicted GO |
| BP | GO:0070925 | organelle assembly | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR022755 | Znf_C2H2_jaz | 68 | 92 |
| No external refs found! |