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  5. Brara.D01493.1

Brara.D01493.1


Description : ligand-gated cation channel *(GLR)


Gene families : OG_42_0000065 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000065_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.D01493.1
Cluster HCAA Clusters: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
At5g27100 No alias Glutamate receptor 2.1 [Source:UniProtKB/Swiss-Prot;Acc:O04660] 0.04 Orthogroups_2024-Update
At5g48410 No alias Glutamate receptor 1.3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FH75] 0.04 Orthogroups_2024-Update
Bradi1g59600 No alias glutamate receptor 3.4 0.02 Orthogroups_2024-Update
Brara.D01744.1 No alias ligand-gated cation channel *(GLR) 0.04 Orthogroups_2024-Update
GRMZM2G066489 No alias glutamate receptor 3.3 0.03 Orthogroups_2024-Update
Glyma.07G226400 No alias glutamate receptor 2.8 0.03 Orthogroups_2024-Update
Glyma.09G197200 No alias glutamate receptor 3.3 0.03 Orthogroups_2024-Update
HORVU5Hr1G010420.23 No alias ligand-gated cation channel *(GLR) 0.04 Orthogroups_2024-Update
HORVU5Hr1G063440.16 No alias ligand-gated cation channel *(GLR) 0.03 Orthogroups_2024-Update
HORVU6Hr1G083570.16 No alias ligand-gated cation channel *(GLR) 0.06 Orthogroups_2024-Update
LOC_Os09g26160 No alias glutamate receptor, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00000830-RA No alias (at2g29100 : 521.0) member of Putative ligand-gated ion... 0.02 Orthogroups_2024-Update
PSME_00018332-RA No alias (at1g05200 : 548.0) member of Putative ligand-gated ion... 0.03 Orthogroups_2024-Update
Potri.018G013200 No alias glutamate receptor 2.8 0.03 Orthogroups_2024-Update
Potri.018G096300 No alias glutamate receptor 2.7 0.03 Orthogroups_2024-Update
Seita.2G335400.1 No alias ligand-gated cation channel *(GLR) 0.03 Orthogroups_2024-Update
Seita.7G214000.1 No alias ligand-gated cation channel *(GLR) 0.04 Orthogroups_2024-Update
Sobic.002G208700.1 No alias ligand-gated cation channel *(GLR) 0.04 Orthogroups_2024-Update
Solyc06g063200 No alias glutamate receptor-like 2.4 0.04 Orthogroups_2024-Update
Sopen02g022210 No alias Receptor family ligand binding region 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0015276 ligand-gated ion channel activity IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004743 pyruvate kinase activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
MF GO:0005544 calcium-dependent phospholipid binding IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predicted GO
MF GO:0030955 potassium ion binding IEP Predicted GO
MF GO:0031420 alkali metal ion binding IEP Predicted GO
CC GO:0033179 proton-transporting V-type ATPase, V0 domain IEP Predicted GO
InterPro domains Description Start Stop
IPR001638 Solute-binding_3/MltF_N 477 801
IPR001828 ANF_lig-bd_rcpt 50 392
IPR001320 Iontro_rcpt 802 840
No external refs found!