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  5. Brara.D01525.1

Brara.D01525.1


Description : Unknown function


Gene families : OG_42_0001036 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001036_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.D01525.1
Cluster HCAA Clusters: Cluster_243

Target Alias Description ECC score Gene Family Method Actions
At3g25020 No alias Receptor-like protein 42 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJS0] 0.03 Orthogroups_2024-Update
At4g13820 No alias Disease resistance like protein... 0.03 Orthogroups_2024-Update
Brara.A02059.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.C01676.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.H03015.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Brara.I05473.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.J02194.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000813 ESCRT I complex IEP Predicted GO
BP GO:0006260 DNA replication IEP Predicted GO
BP GO:0006914 autophagy IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
BP GO:0016197 endosomal transport IEP Predicted GO
CC GO:0030118 clathrin coat IEP Predicted GO
CC GO:0030120 vesicle coat IEP Predicted GO
CC GO:0030125 clathrin vesicle coat IEP Predicted GO
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Predicted GO
CC GO:0030132 clathrin coat of coated pit IEP Predicted GO
MF GO:0031072 heat shock protein binding IEP Predicted GO
BP GO:0032509 endosome transport via multivesicular body sorting pathway IEP Predicted GO
CC GO:0036452 ESCRT complex IEP Predicted GO
MF GO:0043138 3'-5' DNA helicase activity IEP Predicted GO
CC GO:0044433 cytoplasmic vesicle part IEP Predicted GO
CC GO:0044440 endosomal part IEP Predicted GO
CC GO:0044459 plasma membrane part IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Predicted GO
BP GO:0061919 process utilizing autophagic mechanism IEP Predicted GO
BP GO:0071985 multivesicular body sorting pathway IEP Predicted GO
CC GO:0098797 plasma membrane protein complex IEP Predicted GO
CC GO:1902554 serine/threonine protein kinase complex IEP Predicted GO
CC GO:1902911 protein kinase complex IEP Predicted GO
CC GO:1990316 Atg1/ULK1 kinase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 313 335
IPR001611 Leu-rich_rpt 524 584
IPR001611 Leu-rich_rpt 702 756
No external refs found!