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  5. Brara.D01603.1

Brara.D01603.1


Description : cuticular lipid exporter *(PEC1) & subfamily ABCG transporter


Gene families : OG_42_0000055 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000055_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.D01603.1
Cluster HCAA Clusters: Cluster_360

Target Alias Description ECC score Gene Family Method Actions
173584 No alias pleiotropic drug resistance 12 0.02 Orthogroups_2024-Update
441717 No alias pleiotropic drug resistance 12 0.02 Orthogroups_2024-Update
A4A49_23886 No alias pleiotropic drug resistance protein 1 0.03 Orthogroups_2024-Update
Glyma.05G011900 No alias pleiotropic drug resistance 4 0.04 Orthogroups_2024-Update
Glyma.14G127800 No alias pleiotropic drug resistance 12 0.05 Orthogroups_2024-Update
Glyma.17G206300 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
Kfl00175_0190 kfl00175_0190_v1.1 (at2g29940 : 809.0) pleiotropic drug resistance 3... 0.02 Orthogroups_2024-Update
Kfl00616_0050 kfl00616_0050_v1.1 (at1g59870 : 1348.0) ATP binding cassette transporter.... 0.02 Orthogroups_2024-Update
PSME_00012292-RA No alias (at2g29940 : 1536.0) pleiotropic drug resistance 3... 0.03 Orthogroups_2024-Update
Seita.2G152000.1 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
Seita.2G179600.1 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
Sobic.001G190900.1 No alias subfamily ABCG transporter 0.04 Orthogroups_2024-Update
Sobic.010G165500.3 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Sopen12g034810 No alias ABC-2 type transporter 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003887 DNA-directed DNA polymerase activity IEP Predicted GO
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP Predicted GO
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP Predicted GO
MF GO:0004470 malic enzyme activity IEP Predicted GO
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Predicted GO
MF GO:0004620 phospholipase activity IEP Predicted GO
MF GO:0004629 phospholipase C activity IEP Predicted GO
MF GO:0005048 signal sequence binding IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
BP GO:0006621 protein retention in ER lumen IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
MF GO:0016157 sucrose synthase activity IEP Predicted GO
MF GO:0016298 lipase activity IEP Predicted GO
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predicted GO
MF GO:0016411 acylglycerol O-acyltransferase activity IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
MF GO:0016615 malate dehydrogenase activity IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
BP GO:0032507 maintenance of protein location in cell IEP Predicted GO
MF GO:0033218 amide binding IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Predicted GO
MF GO:0042277 peptide binding IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
BP GO:0045185 maintenance of protein location IEP Predicted GO
BP GO:0046486 glycerolipid metabolic process IEP Predicted GO
MF GO:0046923 ER retention sequence binding IEP Predicted GO
BP GO:0051235 maintenance of location IEP Predicted GO
BP GO:0051651 maintenance of location in cell IEP Predicted GO
BP GO:0072595 maintenance of protein localization in organelle IEP Predicted GO
InterPro domains Description Start Stop
IPR013581 PDR_assoc 704 768
IPR013525 ABC_2_trans 495 699
IPR013525 ABC_2_trans 1144 1357
IPR029481 ABC_trans_N 66 126
IPR003439 ABC_transporter-like 151 334
IPR003439 ABC_transporter-like 848 998
No external refs found!