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  5. Brara.D01670.1

Brara.D01670.1


Description : PLATZ-type transcription factor


Gene families : OG_42_0000211 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000211_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.D01670.1
Cluster HCAA Clusters: Cluster_127

Target Alias Description ECC score Gene Family Method Actions
At1g21000 No alias At1g21000/F9H16_1 [Source:UniProtKB/TrEMBL;Acc:Q93V70] 0.03 Orthogroups_2024-Update
Bradi1g35697 No alias PLATZ transcription factor family protein 0.03 Orthogroups_2024-Update
Brara.I02755.1 No alias PLATZ-type transcription factor 0.03 Orthogroups_2024-Update
Glyma.01G078600 No alias PLATZ transcription factor family protein 0.03 Orthogroups_2024-Update
Sopen08g001120 No alias PLATZ transcription factor 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR006734 DUF597 60 141
No external refs found!