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  5. Brara.D01683.1

Brara.D01683.1


Description : transcriptional regulator *(FIT) of iron homeostasis & bHLH-type transcription factor


Gene families : OG_42_0000609 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000609_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.D01683.1
Cluster HCAA Clusters: Cluster_401

Target Alias Description ECC score Gene Family Method Actions
A4A49_08252 No alias transcription factor bhlh35 0.03 Orthogroups_2024-Update
A4A49_21428 No alias transcription factor fer-like iron deficiency-induced... 0.04 Orthogroups_2024-Update
Bradi5g01900 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.12G081200 No alias FER-like regulator of iron uptake 0.02 Orthogroups_2024-Update
HORVU3Hr1G005550.1 No alias Unknown function 0.03 Orthogroups_2024-Update
MA_10433418g0010 No alias (at1g12860 : 83.2) Encodes ICE2 (Inducer of CBF... 0.03 Orthogroups_2024-Update
MA_16489g0010 No alias (at5g57150 : 91.7) basic helix-loop-helix (bHLH)... 0.03 Orthogroups_2024-Update
MA_196213g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00012853-RA No alias (at2g16910 : 88.2) Encodes a basic helix-loop helix... 0.02 Orthogroups_2024-Update
PSME_00047880-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00048166-RA No alias (at2g16910 : 116.0) Encodes a basic helix-loop helix... 0.02 Orthogroups_2024-Update
Solyc05g014590 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0002376 immune system process IEP Predicted GO
MF GO:0004559 alpha-mannosidase activity IEP Predicted GO
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP Predicted GO
BP GO:0006013 mannose metabolic process IEP Predicted GO
BP GO:0006955 immune response IEP Predicted GO
BP GO:0009611 response to wounding IEP Predicted GO
MF GO:0015923 mannosidase activity IEP Predicted GO
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016972 thiol oxidase activity IEP Predicted GO
BP GO:0045087 innate immune response IEP Predicted GO
MF GO:0051920 peroxiredoxin activity IEP Predicted GO
InterPro domains Description Start Stop
IPR011598 bHLH_dom 131 176
No external refs found!