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  5. Brara.D01718.1

Brara.D01718.1


Description : Globulin-type seed storage protein


Gene families : OG_42_0001245 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001245_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.D01718.1
Cluster HCAA Clusters: Cluster_108

Target Alias Description ECC score Gene Family Method Actions
Bradi2g62587 No alias RmlC-like cupins superfamily protein 0.03 Orthogroups_2024-Update
Brara.F00469.1 No alias Globulin-type seed storage protein 0.03 Orthogroups_2024-Update
HORVU3Hr1G116010.2 No alias Globulin-type seed storage protein 0.03 Orthogroups_2024-Update
LOC_Os05g02520 No alias cupin domain containing protein, expressed 0.02 Orthogroups_2024-Update
Potri.001G402600 No alias RmlC-like cupins superfamily protein 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Predicted GO
CC GO:0000930 gamma-tubulin complex IEP Predicted GO
CC GO:0000931 gamma-tubulin large complex IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
BP GO:0031503 protein-containing complex localization IEP Predicted GO
MF GO:0033218 amide binding IEP Predicted GO
BP GO:0033566 gamma-tubulin complex localization IEP Predicted GO
BP GO:0034629 cellular protein-containing complex localization IEP Predicted GO
CC GO:0044450 microtubule organizing center part IEP Predicted GO
MF GO:1901567 fatty acid derivative binding IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR006045 Cupin_1 196 338
IPR006045 Cupin_1 9 157
No external refs found!