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  5. Brara.D01786.1

Brara.D01786.1


Description : clade B phosphatase


Gene families : OG_42_0000847 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000847_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.D01786.1
Cluster HCAA Clusters: Cluster_283

Target Alias Description ECC score Gene Family Method Actions
Brara.C02062.1 No alias clade B phosphatase 0.04 Orthogroups_2024-Update
Brara.E00564.1 No alias clade B phosphatase 0.03 Orthogroups_2024-Update
MA_183946g0010 No alias (at2g30020 : 299.0) Encodes AP2C1. Belongs to the clade... 0.04 Orthogroups_2024-Update
MA_3395g0010 No alias (at2g30020 : 322.0) Encodes AP2C1. Belongs to the clade... 0.03 Orthogroups_2024-Update
PSME_00040514-RA No alias (at2g30020 : 329.0) Encodes AP2C1. Belongs to the clade... 0.03 Orthogroups_2024-Update
Potri.008G070400 No alias phosphatase 2C5 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004089 carbonate dehydratase activity IEP Predicted GO
MF GO:0004527 exonuclease activity IEP Predicted GO
MF GO:0004529 exodeoxyribonuclease activity IEP Predicted GO
MF GO:0004536 deoxyribonuclease activity IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
MF GO:0008297 single-stranded DNA exodeoxyribonuclease activity IEP Predicted GO
MF GO:0008409 5'-3' exonuclease activity IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
MF GO:0016796 exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0016895 exodeoxyribonuclease activity, producing 5'-phosphomonoesters IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
MF GO:0035312 5'-3' exodeoxyribonuclease activity IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
MF GO:0045145 single-stranded DNA 5'-3' exodeoxyribonuclease activity IEP Predicted GO
MF GO:0046873 metal ion transmembrane transporter activity IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase_dom 112 356
No external refs found!