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  5. Brara.D01872.1

Brara.D01872.1


Description : Unknown function


Gene families : OG_42_0001224 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001224_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.D01872.1
Cluster HCAA Clusters: Cluster_403

Target Alias Description ECC score Gene Family Method Actions
At1g43730 No alias RNA-directed DNA polymerase (Reverse... 0.03 Orthogroups_2024-Update
At4g04650 No alias AT4g04650 protein [Source:UniProtKB/TrEMBL;Acc:Q9S9V5] 0.04 Orthogroups_2024-Update
At5g18880 No alias RNA-directed DNA polymerase (Reverse... 0.04 Orthogroups_2024-Update
Brara.F02942.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004655 porphobilinogen synthase activity IEP Predicted GO
MF GO:0005544 calcium-dependent phospholipid binding IEP Predicted GO
CC GO:0005669 transcription factor TFIID complex IEP Predicted GO
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Predicted GO
BP GO:0006694 steroid biosynthetic process IEP Predicted GO
BP GO:0008202 steroid metabolic process IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
BP GO:0016125 sterol metabolic process IEP Predicted GO
BP GO:0016126 sterol biosynthetic process IEP Predicted GO
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Predicted GO
BP GO:0019915 lipid storage IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR026960 RVT-Znf 2 38
No external refs found!