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  5. Brara.D01881.1

Brara.D01881.1


Description : plant-specific ALOG-type transcription factor


Gene families : OG_42_0000294 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000294_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.D01881.1
Cluster HCAA Clusters: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
A4A49_21067 No alias protein g1-like9 0.03 Orthogroups_2024-Update
A4A49_35584 No alias protein light-dependent short hypocotyls 10 0.03 Orthogroups_2024-Update
Brara.A02658.1 No alias plant-specific ALOG-type transcription factor 0.03 Orthogroups_2024-Update
Glyma.18G058600 No alias Protein of unknown function (DUF640) 0.04 Orthogroups_2024-Update
Glyma.19G165300 No alias Protein of unknown function (DUF640) 0.02 Orthogroups_2024-Update
Glyma.20G223100 No alias Protein of unknown function (DUF640) 0.03 Orthogroups_2024-Update
HORVU1Hr1G041240.5 No alias plant-specific ALOG-type transcription factor 0.02 Orthogroups_2024-Update
LOC_Os02g56610 No alias DUF640 domain containing protein, putative, expressed 0.04 Orthogroups_2024-Update
LOC_Os06g46030 No alias DUF640 domain containing protein, putative, expressed 0.03 Orthogroups_2024-Update
PSME_00040596-RA No alias (at2g31160 : 184.0) LIGHT SENSITIVE HYPOCOTYLS 3 (LSH3);... 0.03 Orthogroups_2024-Update
Potri.004G057300 No alias Protein of unknown function (DUF640) 0.03 Orthogroups_2024-Update
Potri.011G156600 No alias Protein of unknown function (DUF640) 0.04 Orthogroups_2024-Update
Sobic.009G170100.1 No alias plant-specific ALOG-type transcription factor 0.03 Orthogroups_2024-Update
Solyc05g055020 No alias LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640)... 0.03 Orthogroups_2024-Update
Sopen02g018650 No alias Protein of unknown function (DUF640) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
CC GO:0005669 transcription factor TFIID complex IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Predicted GO
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Predicted GO
BP GO:0015931 nucleobase-containing compound transport IEP Predicted GO
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016759 cellulose synthase activity IEP Predicted GO
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
BP GO:0030243 cellulose metabolic process IEP Predicted GO
BP GO:0030244 cellulose biosynthetic process IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
CC GO:0044431 Golgi apparatus part IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
CC GO:0098588 bounding membrane of organelle IEP Predicted GO
BP GO:1901264 carbohydrate derivative transport IEP Predicted GO
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR006936 ALOG_dom 41 164
No external refs found!