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  5. Brara.D01942.1

Brara.D01942.1


Description : Unknown function


Gene families : OG_42_0000317 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000317_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.D01942.1
Cluster HCAA Clusters: Cluster_401

Target Alias Description ECC score Gene Family Method Actions
At1g53790 No alias F-box and associated interaction domains-containing... 0.04 Orthogroups_2024-Update
At4g13060 No alias F-box associated ubiquitination effector family protein... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
BP GO:0010035 response to inorganic substance IEP Predicted GO
BP GO:0010038 response to metal ion IEP Predicted GO
MF GO:0016755 transferase activity, transferring amino-acyl groups IEP Predicted GO
MF GO:0016756 glutathione gamma-glutamylcysteinyltransferase activity IEP Predicted GO
BP GO:0019748 secondary metabolic process IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
BP GO:0044550 secondary metabolite biosynthetic process IEP Predicted GO
BP GO:0046937 phytochelatin metabolic process IEP Predicted GO
BP GO:0046938 phytochelatin biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR013187 F-box-assoc_dom_typ3 191 318
IPR001810 F-box_dom 33 67
No external refs found!