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Description : ligand-gated cation channel *(GLR)
Gene families : OG_42_0000065 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000065_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa: Brara.D01954.1 | |
| Cluster | HCAA Clusters: Cluster_104 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Glyma.14G083200 | No alias | glutamate receptor 2.7 | 0.04 | Orthogroups_2024-Update | |
| HORVU5Hr1G063540.6 | No alias | ligand-gated cation channel *(GLR) | 0.03 | Orthogroups_2024-Update | |
| MA_46902g0010 | No alias | (at1g05200 : 769.0) member of Putative ligand-gated ion... | 0.03 | Orthogroups_2024-Update | |
| PSME_00007782-RA | No alias | (at2g17260 : 247.0) Encodes a glutamate receptor.... | 0.03 | Orthogroups_2024-Update | |
| PSME_00037074-RA | No alias | (at1g05200 : 98.6) member of Putative ligand-gated ion... | 0.02 | Orthogroups_2024-Update | |
| Sobic.010G068600.1 | No alias | ligand-gated cation channel *(GLR) | 0.04 | Orthogroups_2024-Update | |
| evm.model.contig_3514.1 | No alias | (at4g35290 : 111.0) Encodes a putative glutamate... | 0.01 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000271 | polysaccharide biosynthetic process | IEP | Predicted GO |
| MF | GO:0001871 | pattern binding | IEP | Predicted GO |
| MF | GO:0003779 | actin binding | IEP | Predicted GO |
| MF | GO:0003824 | catalytic activity | IEP | Predicted GO |
| MF | GO:0005542 | folic acid binding | IEP | Predicted GO |
| BP | GO:0005976 | polysaccharide metabolic process | IEP | Predicted GO |
| BP | GO:0006073 | cellular glucan metabolic process | IEP | Predicted GO |
| MF | GO:0008092 | cytoskeletal protein binding | IEP | Predicted GO |
| BP | GO:0009250 | glucan biosynthetic process | IEP | Predicted GO |
| BP | GO:0016051 | carbohydrate biosynthetic process | IEP | Predicted GO |
| MF | GO:0016740 | transferase activity | IEP | Predicted GO |
| MF | GO:0016759 | cellulose synthase activity | IEP | Predicted GO |
| MF | GO:0016760 | cellulose synthase (UDP-forming) activity | IEP | Predicted GO |
| MF | GO:0019842 | vitamin binding | IEP | Predicted GO |
| BP | GO:0030243 | cellulose metabolic process | IEP | Predicted GO |
| BP | GO:0030244 | cellulose biosynthetic process | IEP | Predicted GO |
| MF | GO:0030246 | carbohydrate binding | IEP | Predicted GO |
| MF | GO:0030247 | polysaccharide binding | IEP | Predicted GO |
| MF | GO:0031406 | carboxylic acid binding | IEP | Predicted GO |
| MF | GO:0033218 | amide binding | IEP | Predicted GO |
| BP | GO:0033692 | cellular polysaccharide biosynthetic process | IEP | Predicted GO |
| BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | Predicted GO |
| MF | GO:0035251 | UDP-glucosyltransferase activity | IEP | Predicted GO |
| MF | GO:0043177 | organic acid binding | IEP | Predicted GO |
| BP | GO:0044042 | glucan metabolic process | IEP | Predicted GO |
| BP | GO:0044262 | cellular carbohydrate metabolic process | IEP | Predicted GO |
| BP | GO:0044264 | cellular polysaccharide metabolic process | IEP | Predicted GO |
| MF | GO:0046527 | glucosyltransferase activity | IEP | Predicted GO |
| BP | GO:0051273 | beta-glucan metabolic process | IEP | Predicted GO |
| BP | GO:0051274 | beta-glucan biosynthetic process | IEP | Predicted GO |
| MF | GO:0072341 | modified amino acid binding | IEP | Predicted GO |
No InterPro domains available for this sequence
| No external refs found! |