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  5. Brara.D02059.1

Brara.D02059.1


Description : component *(uS5c) of small plastid ribosomal-subunit proteome


Gene families : OG_42_0006823 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006823_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Brassica rapa: Brara.D02059.1
Cluster HCAA Clusters: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
A4A49_19809 No alias 30s ribosomal protein s5, chloroplastic 0.05 Orthogroups_2024-Update
Bradi2g06080 No alias Ribosomal protein S5 family protein 0.04 Orthogroups_2024-Update
Cre16.g659950 No alias Ribosomal protein S5 family protein 0.1 Orthogroups_2024-Update
GRMZM2G025855 No alias Ribosomal protein S5 family protein 0.03 Orthogroups_2024-Update
Glyma.07G198500 No alias Ribosomal protein S5 family protein 0.05 Orthogroups_2024-Update
Glyma.13G177900 No alias Ribosomal protein S5 family protein 0.06 Orthogroups_2024-Update
HORVU4Hr1G038570.1 No alias component *(uS5c) of small plastid ribosomal-subunit proteome 0.15 Orthogroups_2024-Update
Kfl00419_0080 kfl00419_0080_v1.1 (at2g33800 : 169.0) Ribosomal protein S5 family protein;... 0.07 Orthogroups_2024-Update
Mp8g10330.1 No alias component psRPS5 of small ribosomal subunit proteome 0.04 Orthogroups_2024-Update
Potri.004G045700 No alias Ribosomal protein S5 family protein 0.05 Orthogroups_2024-Update
Pp1s2_598V6 No alias ribosomal protein s5 0.06 Orthogroups_2024-Update
Pp1s45_164V6 No alias 30s ribosomal protein s5 0.1 Orthogroups_2024-Update
Pp1s61_236V6 No alias 30s ribosomal protein s5 0.09 Orthogroups_2024-Update
Seita.9G187900.1 No alias component *(uS5c) of small plastid ribosomal-subunit proteome 0.12 Orthogroups_2024-Update
Sobic.001G191000.1 No alias component *(uS5c) of small plastid ribosomal-subunit proteome 0.1 Orthogroups_2024-Update
Sopen02g022830 No alias Ribosomal protein S5, C-terminal domain 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA 16Dec
MF GO:0003735 structural constituent of ribosome IEA 16Dec
CC GO:0005840 ribosome IEA 16Dec
BP GO:0006412 translation IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0000287 magnesium ion binding IEP Predicted GO
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003777 microtubule motor activity IEP Predicted GO
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Predicted GO
MF GO:0004109 coproporphyrinogen oxidase activity IEP Predicted GO
MF GO:0004655 porphobilinogen synthase activity IEP Predicted GO
MF GO:0004749 ribose phosphate diphosphokinase activity IEP Predicted GO
MF GO:0004784 superoxide dismutase activity IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
BP GO:0006399 tRNA metabolic process IEP Predicted GO
BP GO:0006400 tRNA modification IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predicted GO
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Predicted GO
BP GO:0006801 superoxide metabolic process IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
MF GO:0008175 tRNA methyltransferase activity IEP Predicted GO
MF GO:0008176 tRNA (guanine-N7-)-methyltransferase activity IEP Predicted GO
BP GO:0009262 deoxyribonucleotide metabolic process IEP Predicted GO
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Predicted GO
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Predicted GO
MF GO:0016778 diphosphotransferase activity IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
BP GO:0018130 heterocycle biosynthetic process IEP Predicted GO
BP GO:0019438 aromatic compound biosynthetic process IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
BP GO:0072593 reactive oxygen species metabolic process IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:0140101 catalytic activity, acting on a tRNA IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
BP GO:1901362 organic cyclic compound biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR005324 Ribosomal_S5_C 223 293
IPR013810 Ribosomal_S5_N 146 210
No external refs found!