Brara.D02112.1

Description : WRKY-type transcription factor

Gene families : OG_42_0000005 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.D02112.1
Cluster	HCAA Clusters: Cluster_16

Target	Alias	Description	ECC score	Gene Family Method
A4A49_15476	No alias	putative wrky transcription factor 4	0.01	Orthogroups_2024-Update
A4A49_39379	No alias	putative wrky transcription factor 3	0.01	Orthogroups_2024-Update
AC205562.3_FG002	No alias	WRKY family transcription factor	0.02	Orthogroups_2024-Update
Brara.B01768.1	No alias	WRKY-type transcription factor	0.01	Orthogroups_2024-Update
Brara.H01547.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Brara.I02900.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
GRMZM2G038158	No alias	WRKY family transcription factor	0.02	Orthogroups_2024-Update
Glyma.09G240000	No alias	WRKY DNA-binding protein 72	0.02	Orthogroups_2024-Update
Glyma.18G263400	No alias	WRKY DNA-binding protein 3	0.01	Orthogroups_2024-Update
MA_6177g0010	No alias	(at4g11070 : 114.0) member of WRKY Transcription Factor;...	0.04	Orthogroups_2024-Update
PSME_00008606-RA	No alias	(at5g56270 : 338.0) WRKY transcription factor 2; WRKY...	0.01	Orthogroups_2024-Update
PSME_00012259-RA	No alias	(at1g62300 : 138.0) Encodes a transcription factor...	0.01	Orthogroups_2024-Update
PSME_00013774-RA	No alias	(at1g62300 : 180.0) Encodes a transcription factor...	0.01	Orthogroups_2024-Update
PSME_00015239-RA	No alias	(at1g18860 : 197.0) member of WRKY Transcription Factor;...	0.02	Orthogroups_2024-Update
PSME_00036209-RA	No alias	(at4g01720 : 157.0) member of WRKY Transcription Factor;...	0.02	Orthogroups_2024-Update
PSME_00039099-RA	No alias	(at3g01970 : 111.0) member of WRKY Transcription Factor;...	0.02	Orthogroups_2024-Update
PSME_00040311-RA	No alias	no hits & (original description: no original description)	0.01	Orthogroups_2024-Update
PSME_00042021-RA	No alias	(at4g22070 : 263.0) member of WRKY Transcription Factor;...	0.02	Orthogroups_2024-Update
PSME_00048777-RA	No alias	(at4g23810 : 118.0) member of WRKY Transcription Factor;...	0.02	Orthogroups_2024-Update
Potri.004G120800	No alias	WRKY DNA-binding protein 3	0.02	Orthogroups_2024-Update
Pp1s407_55V6	No alias	wrky transcription	0.02	Orthogroups_2024-Update
Pp1s5_354V6	No alias	wrky transcription	0.03	Orthogroups_2024-Update
Seita.1G062100.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Seita.5G132800.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.003G138400.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Sobic.005G013400.1	No alias	WRKY-type transcription factor	0.01	Orthogroups_2024-Update
Solyc08g081630	No alias	WRKY transcription factor 56	0.02	Orthogroups_2024-Update
Sopen01g031040	No alias	WRKY DNA -binding domain	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	16Dec
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	16Dec
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006811	ion transport	IEP	Predicted GO
BP	GO:0006812	cation transport	IEP	Predicted GO
MF	GO:0008324	cation transmembrane transporter activity	IEP	Predicted GO
MF	GO:0015075	ion transmembrane transporter activity	IEP	Predicted GO
MF	GO:0015077	monovalent inorganic cation transmembrane transporter activity	IEP	Predicted GO
MF	GO:0015078	proton transmembrane transporter activity	IEP	Predicted GO
MF	GO:0015291	secondary active transmembrane transporter activity	IEP	Predicted GO
MF	GO:0015297	antiporter activity	IEP	Predicted GO
MF	GO:0015298	solute:cation antiporter activity	IEP	Predicted GO
MF	GO:0015299	solute:proton antiporter activity	IEP	Predicted GO
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	IEP	Predicted GO
MF	GO:0022804	active transmembrane transporter activity	IEP	Predicted GO
MF	GO:0022890	inorganic cation transmembrane transporter activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	220	277

External Links

No external refs found!

Brara.D02112.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation