Brara.D02132.1


Description : RNA editing factor *(MORF)


Gene families : OG_42_0000510 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000510_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.D02132.1
Cluster HCAA Clusters: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
A4A49_31672 No alias multiple organellar rna editing factor 3, mitochondrial 0.03 Orthogroups_2024-Update
At1g11430 No alias Multiple organellar RNA editing factor 9, chloroplastic... 0.05 Orthogroups_2024-Update
At4g20020 No alias Multiple organellar RNA editing factor 1, mitochondrial... 0.03 Orthogroups_2024-Update
Bradi1g50640 No alias differentiation and greening-like 1 0.03 Orthogroups_2024-Update
Bradi3g14650 No alias plastid developmental protein DAG, putative 0.06 Orthogroups_2024-Update
Bradi4g22160 No alias Function unknown 0.05 Orthogroups_2024-Update
Bradi5g20660 No alias differentiation and greening-like 1 0.05 Orthogroups_2024-Update
Brara.A01086.1 No alias RNA editing factor *(MORF) 0.03 Orthogroups_2024-Update
Brara.F00767.1 No alias RNA editing factor *(MORF) 0.03 Orthogroups_2024-Update
Brara.G00411.1 No alias RNA editing factor *(MORF) 0.03 Orthogroups_2024-Update
GRMZM2G003765 No alias plastid developmental protein DAG, putative 0.04 Orthogroups_2024-Update
Glyma.07G245000 No alias plastid developmental protein DAG, putative 0.04 Orthogroups_2024-Update
Glyma.10G183800 No alias differentiation and greening-like 1 0.05 Orthogroups_2024-Update
Glyma.12G169200 No alias Function unknown 0.03 Orthogroups_2024-Update
Glyma.12G228400 No alias cobalt ion binding 0.07 Orthogroups_2024-Update
Glyma.13G271400 No alias cobalt ion binding 0.03 Orthogroups_2024-Update
Glyma.15G064300 No alias plastid developmental protein DAG, putative 0.04 Orthogroups_2024-Update
HORVU2Hr1G101720.2 No alias RNA editing factor *(MORF) 0.04 Orthogroups_2024-Update
HORVU4Hr1G016440.1 No alias RNA editing factor *(MORF) 0.03 Orthogroups_2024-Update
HORVU6Hr1G002030.1 No alias RNA editing factor *(MORF) 0.02 Orthogroups_2024-Update
HORVU7Hr1G073170.2 No alias RNA editing factor *(MORF) 0.06 Orthogroups_2024-Update
LOC_Os08g04450 No alias DAG protein, chloroplast precursor, putative, expressed 0.02 Orthogroups_2024-Update
Potri.008G169900 No alias plastid developmental protein DAG, putative 0.03 Orthogroups_2024-Update
Potri.011G112200 No alias cobalt ion binding 0.04 Orthogroups_2024-Update
Seita.4G012800.1 No alias RNA editing factor *(MORF) 0.04 Orthogroups_2024-Update
Seita.6G068800.1 No alias RNA editing factor *(MORF) 0.03 Orthogroups_2024-Update
Seita.6G225500.1 No alias RNA editing factor *(MORF) 0.03 Orthogroups_2024-Update
Seita.8G095000.1 No alias RNA editing factor *(MORF) 0.03 Orthogroups_2024-Update
Sobic.006G204100.1 No alias RNA editing factor *(MORF) 0.03 Orthogroups_2024-Update
Sobic.007G034500.1 No alias RNA editing factor *(MORF) 0.05 Orthogroups_2024-Update
Sobic.010G013900.1 No alias RNA editing factor *(MORF) 0.02 Orthogroups_2024-Update
Solyc01g066060 No alias DAG protein (AHRD V3.3 *** K7TSG0_MAIZE) 0.03 Orthogroups_2024-Update
Solyc02g079210 No alias DAG protein (AHRD V3.3 *** B6SJX7_MAIZE) 0.05 Orthogroups_2024-Update
Solyc02g079770 No alias DAG protein (AHRD V3.3 *** B6TYI4_MAIZE) 0.04 Orthogroups_2024-Update
Solyc06g008220 No alias DAG protein (AHRD V3.3 *** A0A0K9Q0F0_ZOSMR) 0.04 Orthogroups_2024-Update
Sopen02g024540 No alias hypothetical protein 0.03 Orthogroups_2024-Update
Sopen05g033420 No alias hypothetical protein 0.03 Orthogroups_2024-Update
Sopen10g003300 No alias hypothetical protein 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Predicted GO
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003746 translation elongation factor activity IEP Predicted GO
MF GO:0004556 alpha-amylase activity IEP Predicted GO
MF GO:0004721 phosphoprotein phosphatase activity IEP Predicted GO
MF GO:0004743 pyruvate kinase activity IEP Predicted GO
MF GO:0005049 nuclear export signal receptor activity IEP Predicted GO
MF GO:0005375 copper ion transmembrane transporter activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
CC GO:0005759 mitochondrial matrix IEP Predicted GO
BP GO:0006099 tricarboxylic acid cycle IEP Predicted GO
BP GO:0006101 citrate metabolic process IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
BP GO:0006465 signal peptide processing IEP Predicted GO
BP GO:0006825 copper ion transport IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0008173 RNA methyltransferase activity IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
BP GO:0016999 antibiotic metabolic process IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
BP GO:0017144 drug metabolic process IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
CC GO:0019867 outer membrane IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0030955 potassium ion binding IEP Predicted GO
MF GO:0031267 small GTPase binding IEP Predicted GO
MF GO:0031420 alkali metal ion binding IEP Predicted GO
CC GO:0031974 membrane-enclosed lumen IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
BP GO:0035434 copper ion transmembrane transport IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0035673 oligopeptide transmembrane transporter activity IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0042887 amide transmembrane transporter activity IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
CC GO:0043233 organelle lumen IEP Predicted GO
CC GO:0044429 mitochondrial part IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Predicted GO
CC GO:0070013 intracellular organelle lumen IEP Predicted GO
BP GO:0072350 tricarboxylic acid metabolic process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:0140104 molecular carrier activity IEP Predicted GO
MF GO:0140142 nucleocytoplasmic carrier activity IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
MF GO:1904680 peptide transmembrane transporter activity IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!