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  5. Brara.D02143.1

Brara.D02143.1


Description : organellar-signalling mediator *(RCD1)


Gene families : OG_42_0000647 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000647_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.D02143.1
Cluster HCAA Clusters: Cluster_125

Target Alias Description ECC score Gene Family Method Actions
At1g32230 No alias Poly [ADP-ribose] polymerase [Source:UniProtKB/TrEMBL;Acc:M5BF30] 0.03 Orthogroups_2024-Update
Bradi5g25800 No alias WWE protein-protein interaction domain protein family 0.04 Orthogroups_2024-Update
Glyma.04G183100 No alias similar to RCD one 2 0.02 Orthogroups_2024-Update
HORVU1Hr1G050960.3 No alias organellar-signalling mediator *(RCD1) 0.02 Orthogroups_2024-Update
Potri.003G096700 No alias WWE protein-protein interaction domain protein family 0.03 Orthogroups_2024-Update
Potri.015G076500 No alias similar to RCD one 5 0.03 Orthogroups_2024-Update
Pp1s30_104V6 No alias F3C3.1; WWE domain-containing protein / ceo protein,... 0.02 Orthogroups_2024-Update
Pp1s341_28V6 No alias F3C3.1; WWE domain-containing protein / ceo protein,... 0.02 Orthogroups_2024-Update
Seita.1G040500.1 No alias organellar-signalling mediator *(RCD1) 0.03 Orthogroups_2024-Update
Seita.9G005700.1 No alias organellar-signalling mediator *(RCD1) 0.02 Orthogroups_2024-Update
Seita.9G307500.1 No alias organellar-signalling mediator *(RCD1) 0.03 Orthogroups_2024-Update
Sobic.001G006700.2 No alias organellar-signalling mediator *(RCD1) 0.03 Orthogroups_2024-Update
Sobic.001G447100.1 No alias organellar-signalling mediator *(RCD1) 0.02 Orthogroups_2024-Update
Solyc04g077100 No alias Poly [ADP-ribose] polymerase (AHRD V3.3 *** K4BUE7_SOLLC) 0.04 Orthogroups_2024-Update
Solyc05g005290 No alias Poly [ADP-ribose] polymerase (AHRD V3.3 *** K4BW60_SOLLC) 0.02 Orthogroups_2024-Update
Solyc08g005270 No alias Poly [ADP-ribose] polymerase (AHRD V3.3 *** A0A0V0ISK3_SOLCH) 0.02 Orthogroups_2024-Update
Sopen08g001290 No alias RCD1-SRO-TAF4 (RST) plant domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Predicted GO
BP GO:0000097 sulfur amino acid biosynthetic process IEP Predicted GO
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0004014 adenosylmethionine decarboxylase activity IEP Predicted GO
BP GO:0006534 cysteine metabolic process IEP Predicted GO
BP GO:0006535 cysteine biosynthetic process from serine IEP Predicted GO
BP GO:0006563 L-serine metabolic process IEP Predicted GO
BP GO:0006595 polyamine metabolic process IEP Predicted GO
BP GO:0006596 polyamine biosynthetic process IEP Predicted GO
BP GO:0006597 spermine biosynthetic process IEP Predicted GO
BP GO:0006914 autophagy IEP Predicted GO
BP GO:0008215 spermine metabolic process IEP Predicted GO
BP GO:0008216 spermidine metabolic process IEP Predicted GO
BP GO:0008295 spermidine biosynthetic process IEP Predicted GO
MF GO:0008374 O-acyltransferase activity IEP Predicted GO
MF GO:0009001 serine O-acetyltransferase activity IEP Predicted GO
BP GO:0009069 serine family amino acid metabolic process IEP Predicted GO
BP GO:0009070 serine family amino acid biosynthetic process IEP Predicted GO
BP GO:0009309 amine biosynthetic process IEP Predicted GO
MF GO:0016407 acetyltransferase activity IEP Predicted GO
MF GO:0016412 serine O-acyltransferase activity IEP Predicted GO
MF GO:0016413 O-acetyltransferase activity IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
BP GO:0019344 cysteine biosynthetic process IEP Predicted GO
BP GO:0040008 regulation of growth IEP Predicted GO
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Predicted GO
BP GO:0045927 positive regulation of growth IEP Predicted GO
BP GO:0061919 process utilizing autophagic mechanism IEP Predicted GO
BP GO:0097164 ammonium ion metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR022003 RST 448 514
No external refs found!