Brara.D02179.1

Description : E3 ubiquitin ligase

Gene families : OG_42_0000112 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000112_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.D02179.1
Cluster	HCAA Clusters: Cluster_293

Target	Alias	Description	ECC score	Gene Family Method
414754	No alias	plant U-box 25	0.03	Orthogroups_2024-Update
At1g49780	No alias	U-box domain-containing protein 26...	0.04	Orthogroups_2024-Update
GRMZM2G071484	No alias	plant U-box 22	0.02	Orthogroups_2024-Update
GRMZM5G811633	No alias	plant U-box 26	0.02	Orthogroups_2024-Update
HORVU4Hr1G064070.1	No alias	E3 ubiquitin ligase	0.02	Orthogroups_2024-Update
LOC_Os03g13740	No alias	immediate-early fungal elicitor protein CMPG1, putative,...	0.02	Orthogroups_2024-Update
LOC_Os10g03440	No alias	avr9/Cf-9 rapidly elicited protein 74, putative, expressed	0.03	Orthogroups_2024-Update
MA_415393g0010	No alias	(at3g19380 : 146.0) plant U-box 25 (PUB25); FUNCTIONS...	0.03	Orthogroups_2024-Update
PSME_00056516-RA	No alias	(at3g19380 : 420.0) plant U-box 25 (PUB25); FUNCTIONS...	0.02	Orthogroups_2024-Update
Potri.009G016200	No alias	plant U-box 23	0.03	Orthogroups_2024-Update
Sobic.001G272900.1	No alias	Unknown function	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	16Dec
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016567	protein ubiquitination	IEA	16Dec
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0016042	lipid catabolic process	IEP	Predicted GO
MF	GO:0016624	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor	IEP	Predicted GO
MF	GO:0016887	ATPase activity	IEP	Predicted GO
MF	GO:0016903	oxidoreductase activity, acting on the aldehyde or oxo group of donors	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003613	Ubox_domain	7	76

External Links

No external refs found!