Brara.D02187.1

Description : mTERF-type transcription factor

Gene families : OG_42_0001346 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001346_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.D02187.1
Cluster	HCAA Clusters: Cluster_215

Target	Alias	Description	ECC score	Gene Family Method
A4A49_33859	No alias	transcription termination factor mtef1, chloroplastic	0.03	Orthogroups_2024-Update
At2g36000	No alias	At2g36000/F11F19.9 [Source:UniProtKB/TrEMBL;Acc:Q9SJ50]	0.05	Orthogroups_2024-Update
Glyma.09G089600	No alias	Mitochondrial transcription termination factor family protein	0.03	Orthogroups_2024-Update
Glyma.09G244100	No alias	Mitochondrial transcription termination factor family protein	0.04	Orthogroups_2024-Update
Solyc02g021430	No alias	Mitochondrial transcription termination factor family...	0.02	Orthogroups_2024-Update
evm.model.contig_3427.6	No alias	(at2g03050 : 89.4) A locus involved in embryogenesis....	0.02	Orthogroups_2024-Update
evm.model.tig00000367.14	No alias	no hits & (original description: no original description)	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003690	double-stranded DNA binding	IEA	16Dec
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0004176	ATP-dependent peptidase activity	IEP	Predicted GO
MF	GO:0004252	serine-type endopeptidase activity	IEP	Predicted GO
MF	GO:0004420	hydroxymethylglutaryl-CoA reductase (NADPH) activity	IEP	Predicted GO
BP	GO:0015936	coenzyme A metabolic process	IEP	Predicted GO
BP	GO:0033865	nucleoside bisphosphate metabolic process	IEP	Predicted GO
BP	GO:0033875	ribonucleoside bisphosphate metabolic process	IEP	Predicted GO
BP	GO:0034032	purine nucleoside bisphosphate metabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003690	MTERF	199	305

External Links

No external refs found!

Brara.D02187.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation