Brara.D02197.1

Description : component *(uS11) of small ribosomal-subunit (SSU) proteome

Gene families : OG_42_0001574 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001574_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.D02197.1
Cluster	HCAA Clusters: Cluster_91

Target	Alias	Description	ECC score	Gene Family Method
183051	No alias	Ribosomal protein S11 family protein	0.1	Orthogroups_2024-Update
At3g52580	No alias	40S ribosomal protein S14-3...	0.03	Orthogroups_2024-Update
Bradi1g32830	No alias	Ribosomal protein S11 family protein	0.12	Orthogroups_2024-Update
Bradi3g04790	No alias	Ribosomal protein S11 family protein	0.1	Orthogroups_2024-Update
Bradi5g09460	No alias	Ribosomal protein S11 family protein	0.02	Orthogroups_2024-Update
Brara.A03404.1	No alias	component *(uS11) of small ribosomal-subunit (SSU) proteome	0.11	Orthogroups_2024-Update
Brara.E00860.1	No alias	component *(uS11) of small ribosomal-subunit (SSU) proteome	0.05	Orthogroups_2024-Update
Brara.I03565.1	No alias	component *(uS11) of small ribosomal-subunit (SSU) proteome	0.04	Orthogroups_2024-Update
Brara.J02603.1	No alias	component *(uS11) of small ribosomal-subunit (SSU) proteome	0.12	Orthogroups_2024-Update
Cre11.g480150	No alias	Ribosomal protein S11 family protein	0.08	Orthogroups_2024-Update
GRMZM2G069762	No alias	Ribosomal protein S11 family protein	0.11	Orthogroups_2024-Update
GRMZM2G120432	No alias	Ribosomal protein S11 family protein	0.06	Orthogroups_2024-Update
Glyma.03G241100	No alias	Ribosomal protein S11 family protein	0.04	Orthogroups_2024-Update
Glyma.03G241300	No alias	Ribosomal protein S11 family protein	0.08	Orthogroups_2024-Update
Glyma.13G217200	No alias	Ribosomal protein S11 family protein	0.06	Orthogroups_2024-Update
Glyma.15G095300	No alias	Ribosomal protein S11 family protein	0.12	Orthogroups_2024-Update
Glyma.19G238600	No alias	Ribosomal protein S11 family protein	0.07	Orthogroups_2024-Update
Glyma.19G238800	No alias	Ribosomal protein S11 family protein	0.06	Orthogroups_2024-Update
HORVU0Hr1G004130.1	No alias	component *(uS11) of small ribosomal-subunit (SSU) proteome	0.06	Orthogroups_2024-Update
Kfl00094_0120	kfl00094_0120_v1.1	(p19951\|rs142_maize : 200.0) 40S ribosomal protein S14...	0.02	Orthogroups_2024-Update
LOC_Os02g06700	No alias	ribosomal protein, putative, expressed	0.06	Orthogroups_2024-Update
MA_113075g0010	No alias	(p19951\|rs142_maize : 223.0) 40S ribosomal protein S14...	0.04	Orthogroups_2024-Update
Mp8g03250.1	No alias	component RPS14 of SSU proteome	0.09	Orthogroups_2024-Update
Mp8g10900.1	No alias	component RPS14 of SSU proteome	0.05	Orthogroups_2024-Update
PSME_00002720-RA	No alias	(p19951\|rs142_maize : 226.0) 40S ribosomal protein S14...	0.06	Orthogroups_2024-Update
Potri.001G218700	No alias	Ribosomal protein S11 family protein	0.11	Orthogroups_2024-Update
Potri.004G131800	No alias	Ribosomal protein S11 family protein	0.05	Orthogroups_2024-Update
Potri.011G080500	No alias	Ribosomal protein S11 family protein	0.03	Orthogroups_2024-Update
Pp1s271_98V6	No alias	40s ribosomal protein	0.15	Orthogroups_2024-Update
Pp1s316_6V6	No alias	40s ribosomal protein	0.17	Orthogroups_2024-Update
Seita.1G181800.1	No alias	component *(uS11) of small ribosomal-subunit (SSU) proteome	0.06	Orthogroups_2024-Update
Seita.4G260200.1	No alias	component *(uS11) of small ribosomal-subunit (SSU) proteome	0.19	Orthogroups_2024-Update
Seita.7G091900.1	No alias	component *(uS11) of small ribosomal-subunit (SSU) proteome	0.07	Orthogroups_2024-Update
Sobic.006G106100.1	No alias	component *(uS11) of small ribosomal-subunit (SSU) proteome	0.15	Orthogroups_2024-Update
Sobic.010G205400.1	No alias	component *(uS11) of small ribosomal-subunit (SSU) proteome	0.2	Orthogroups_2024-Update
Sobic.010G206200.1	No alias	component *(uS11) of small ribosomal-subunit (SSU) proteome	0.08	Orthogroups_2024-Update
Solyc02g070570	No alias	30S ribosomal protein S11 (AHRD V3.3 *** A0A0K9PCU6_ZOSMR)	0.14	Orthogroups_2024-Update
Solyc09g010100	No alias	30S ribosomal protein S11 (AHRD V3.3 *** A0A0K9PVQ7_ZOSMR)	0.2	Orthogroups_2024-Update
Solyc10g083280	No alias	40S ribosomal protein S14-2	0.18	Orthogroups_2024-Update
Sopen02g019660	No alias	Ribosomal protein S11	0.16	Orthogroups_2024-Update
Sopen09g004840	No alias	Ribosomal protein S11	0.18	Orthogroups_2024-Update
Sopen10g032760	No alias	Ribosomal protein S11	0.21	Orthogroups_2024-Update
evm.model.contig_3384.21	No alias	(p46295\|rs14_chlre : 213.0) 40S ribosomal protein S14 -...	0.19	Orthogroups_2024-Update
evm.model.tig00001154.44	No alias	(p19950\|rs141_maize : 166.0) 40S ribosomal protein S14...	0.11	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	16Dec
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	16Dec
BP	GO:0006412	translation	IEA	16Dec
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003723	RNA binding	IEP	Predicted GO
MF	GO:0003883	CTP synthase activity	IEP	Predicted GO
MF	GO:0003924	GTPase activity	IEP	Predicted GO
MF	GO:0004814	arginine-tRNA ligase activity	IEP	Predicted GO
BP	GO:0006220	pyrimidine nucleotide metabolic process	IEP	Predicted GO
BP	GO:0006221	pyrimidine nucleotide biosynthetic process	IEP	Predicted GO
BP	GO:0006420	arginyl-tRNA aminoacylation	IEP	Predicted GO
MF	GO:0016874	ligase activity	IEP	Predicted GO
BP	GO:0072527	pyrimidine-containing compound metabolic process	IEP	Predicted GO
BP	GO:0072528	pyrimidine-containing compound biosynthetic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001971	Ribosomal_S11	28	146

External Links

No external refs found!

Brara.D02197.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation