1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.D02241.1

Brara.D02241.1


Description : xyloglucan endotransglucosylase/hydrolase *(XTH) & EC_2.4 glycosyltransferase


Gene families : OG_42_0000032 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000032_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.D02241.1
Cluster HCAA Clusters: Cluster_281

Target Alias Description ECC score Gene Family Method Actions
233454 No alias xyloglucan endotransglucosylase/hydrolase 5 0.03 Orthogroups_2024-Update
A4A49_22229 No alias putative xyloglucan endotransglucosylasehydrolase protein 32 0.03 Orthogroups_2024-Update
Brara.A02345.1 No alias xyloglucan endotransglucosylase/hydrolase *(XTH) &... 0.03 Orthogroups_2024-Update
GRMZM2G112619 No alias xyloglucan endotransglucosylase/hydrolase 26 0.03 Orthogroups_2024-Update
Glyma.02G068900 No alias xyloglucan endotransglucosylase/hydrolase 5 0.03 Orthogroups_2024-Update
Glyma.11G193600 No alias xyloglucan endotransglucosylase/hydrolase 32 0.04 Orthogroups_2024-Update
Glyma.19G106700 No alias xyloglucan endotransglucosylase/hydrolase 5 0.03 Orthogroups_2024-Update
LOC_Os03g01800 No alias glycosyl hydrolases family 16, putative, expressed 0.02 Orthogroups_2024-Update
MA_10429607g0020 No alias (p35694|bru1_soybn : 341.0) Brassinosteroid-regulated... 0.03 Orthogroups_2024-Update
MA_11177g0010 No alias (at5g57550 : 312.0) xyloglucan... 0.02 Orthogroups_2024-Update
Mp2g22860.1 No alias Enzyme classification.EC_2 transferases.EC_2.4... 0.03 Orthogroups_2024-Update
Mp4g10000.1 No alias Enzyme classification.EC_2 transferases.EC_2.4... 0.02 Orthogroups_2024-Update
PSME_00017837-RA No alias (at5g57540 : 330.0) Encodes a xyloglucan... 0.02 Orthogroups_2024-Update
PSME_00033686-RA No alias (at2g36870 : 309.0) xyloglucan... 0.02 Orthogroups_2024-Update
PSME_00045798-RA No alias (at2g36870 : 301.0) xyloglucan... 0.03 Orthogroups_2024-Update
PSME_00047162-RA No alias (at4g03210 : 301.0) encodes a member of xyloglucan... 0.02 Orthogroups_2024-Update
Pp1s168_29V6 No alias xyloglucan endotransglycosylase 0.02 Orthogroups_2024-Update
Pp1s213_129V6 No alias xyloglucan endotransglucosylase hydrolase 0.02 Orthogroups_2024-Update
Pp1s309_38V6 No alias xyloglucan endotransglycosylase 0.02 Orthogroups_2024-Update
Seita.2G313800.1 No alias xyloglucan endotransglucosylase/hydrolase *(XTH) &... 0.02 Orthogroups_2024-Update
Seita.4G246400.1 No alias EC_2.4 glycosyltransferase 0.03 Orthogroups_2024-Update
Sobic.010G246500.1 No alias EC_2.4 glycosyltransferase 0.03 Orthogroups_2024-Update
Solyc03g093080 No alias Xyloglucan endotransglucosylase/hydrolase (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc03g093120 No alias xyloglucan endotransglucosylase-hydrolase 0.03 Orthogroups_2024-Update
Solyc03g093130 No alias xyloglucan endotransglucosylase-hydrolase 3 0.03 Orthogroups_2024-Update
Solyc11g066270 No alias xyloglucan endotransglucosylase-hydrolase 6 0.04 Orthogroups_2024-Update
Sopen11g025320 No alias Glycosyl hydrolases family 16 0.04 Orthogroups_2024-Update
Sopen12g008060 No alias Glycosyl hydrolases family 16 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA 16Dec
CC GO:0005618 cell wall IEA 16Dec
BP GO:0005975 carbohydrate metabolic process IEA 16Dec
BP GO:0006073 cellular glucan metabolic process IEA 16Dec
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEA 16Dec
CC GO:0048046 apoplast IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003896 DNA primase activity IEP Predicted GO
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0004659 prenyltransferase activity IEP Predicted GO
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
BP GO:0006269 DNA replication, synthesis of RNA primer IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
MF GO:0008318 protein prenyltransferase activity IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
BP GO:0016197 endosomal transport IEP Predicted GO
BP GO:0016482 cytosolic transport IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
BP GO:0018342 protein prenylation IEP Predicted GO
CC GO:0030906 retromer, cargo-selective complex IEP Predicted GO
BP GO:0042147 retrograde transport, endosome to Golgi IEP Predicted GO
MF GO:0043015 gamma-tubulin binding IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
BP GO:0097354 prenylation IEP Predicted GO
InterPro domains Description Start Stop
IPR010713 XET_C 259 297
IPR000757 GH16 45 226
No external refs found!