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  5. Brara.D02243.1

Brara.D02243.1


Description : MYB class-R2R3 subgroup-14 transcription factor


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.D02243.1
Cluster HCAA Clusters: Cluster_304

Target Alias Description ECC score Gene Family Method Actions
A4A49_20993 No alias transcription factor myb39 0.03 Orthogroups_2024-Update
A4A49_28774 No alias anthocyanin regulatory c1 protein 0.03 Orthogroups_2024-Update
At1g68320 No alias Transcription factor MYB62... 0.03 Orthogroups_2024-Update
At3g02940 No alias At3g02940 [Source:UniProtKB/TrEMBL;Acc:Q9LDI5] 0.05 Orthogroups_2024-Update
At5g56110 No alias MYB80 [Source:UniProtKB/TrEMBL;Acc:A0A178UM75] 0.03 Orthogroups_2024-Update
Bradi4g04627 No alias myb domain protein 112 0.03 Orthogroups_2024-Update
Bradi4g09900 No alias myb domain protein 112 0.03 Orthogroups_2024-Update
Brara.H00653.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.07G242600 No alias myb domain protein 111 0.03 Orthogroups_2024-Update
Glyma.10G132200 No alias myb domain protein 79 0.03 Orthogroups_2024-Update
Glyma.18G259100 No alias myb domain protein 30 0.04 Orthogroups_2024-Update
Glyma.19G022100 No alias myb domain protein 30 0.04 Orthogroups_2024-Update
LOC_Os01g51260 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
MA_10435612g0010 No alias (at5g15310 : 300.0) Member of the R2R3 factor gene... 0.02 Orthogroups_2024-Update
PSME_00018495-RA No alias (at3g02940 : 176.0) Encodes a putative transcription... 0.02 Orthogroups_2024-Update
PSME_00030815-RA No alias (at1g09540 : 235.0) Encodes putative transcription... 0.03 Orthogroups_2024-Update
Potri.006G170800 No alias myb domain protein 36 0.02 Orthogroups_2024-Update
Potri.017G075000 No alias Duplicated homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Pp1s106_216V6 No alias atmyb16 (myb domain protein 16) dna binding transcription factor 0.03 Orthogroups_2024-Update
Sobic.002G201000.1 No alias MYB class-R2R3 subgroup-1 transcription factor 0.04 Orthogroups_2024-Update
Solyc01g102340 No alias R2R3MYB transcription factor 61 0.03 Orthogroups_2024-Update
Solyc02g087960 No alias R2R3MYB transcription factor 94 0.03 Orthogroups_2024-Update
Solyc02g093740 No alias R2R3MYB transcription factor 99 0.03 Orthogroups_2024-Update
Solyc04g014470 No alias R2R3MYB transcription factor 20 0.05 Orthogroups_2024-Update
Solyc06g083900 No alias R2R3MYB transcription factor 13 0.02 Orthogroups_2024-Update
Sopen04g006600 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update
Sopen05g003580 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA IEP Predicted GO
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Predicted GO
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Predicted GO
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Predicted GO
MF GO:0005319 lipid transporter activity IEP Predicted GO
MF GO:0005548 phospholipid transporter activity IEP Predicted GO
CC GO:0005739 mitochondrion IEP Predicted GO
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
BP GO:0006401 RNA catabolic process IEP Predicted GO
BP GO:0006402 mRNA catabolic process IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
BP GO:0006869 lipid transport IEP Predicted GO
BP GO:0007009 plasma membrane organization IEP Predicted GO
MF GO:0008047 enzyme activator activity IEP Predicted GO
BP GO:0009892 negative regulation of metabolic process IEP Predicted GO
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0010629 negative regulation of gene expression IEP Predicted GO
MF GO:0015035 protein disulfide oxidoreductase activity IEP Predicted GO
MF GO:0015036 disulfide oxidoreductase activity IEP Predicted GO
BP GO:0015711 organic anion transport IEP Predicted GO
BP GO:0015748 organophosphate ester transport IEP Predicted GO
BP GO:0015914 phospholipid transport IEP Predicted GO
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Predicted GO
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Predicted GO
MF GO:0016972 thiol oxidase activity IEP Predicted GO
BP GO:0017121 plasma membrane phospholipid scrambling IEP Predicted GO
MF GO:0017128 phospholipid scramblase activity IEP Predicted GO
BP GO:0018208 peptidyl-proline modification IEP Predicted GO
CC GO:0031011 Ino80 complex IEP Predicted GO
CC GO:0033202 DNA helicase complex IEP Predicted GO
BP GO:0034204 lipid translocation IEP Predicted GO
BP GO:0034975 protein folding in endoplasmic reticulum IEP Predicted GO
BP GO:0043085 positive regulation of catalytic activity IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
BP GO:0044093 positive regulation of molecular function IEP Predicted GO
CC GO:0044454 nuclear chromosome part IEP Predicted GO
BP GO:0045332 phospholipid translocation IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0050790 regulation of catalytic activity IEP Predicted GO
BP GO:0061024 membrane organization IEP Predicted GO
BP GO:0065009 regulation of molecular function IEP Predicted GO
CC GO:0070603 SWI/SNF superfamily-type complex IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
BP GO:0097035 regulation of membrane lipid distribution IEP Predicted GO
CC GO:0097346 INO80-type complex IEP Predicted GO
CC GO:1904949 ATPase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 69 111
IPR001005 SANT/Myb 14 62
No external refs found!