Brara.D02269.1

Description : subfamily ABCG transporter & jasmonic acid transporter *(JAT)

Gene families : OG_42_0001141 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001141_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.D02269.1
Cluster	HCAA Clusters: Cluster_74

Target	Alias	Description	ECC score	Gene Family Method
At3g55090	No alias	ABC transporter G family member 16...	0.04	Orthogroups_2024-Update
Bradi1g62810	No alias	ABC-2 type transporter family protein	0.02	Orthogroups_2024-Update
Brara.I03774.1	No alias	subfamily ABCG transporter & jasmonic acid transporter *(JAT)	0.03	Orthogroups_2024-Update
LOC_Os03g17350	No alias	white-brown complex homolog protein, putative, expressed	0.03	Orthogroups_2024-Update
Solyc04g010200	No alias	ABC transporter G family member (AHRD V3.3 *** A0A0K9NPK2_ZOSMR)	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	16Dec
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0008144	drug binding	None	Extended
CC	GO:0016020	membrane	IEA	16Dec
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006720	isoprenoid metabolic process	IEP	Predicted GO
MF	GO:0008131	primary amine oxidase activity	IEP	Predicted GO
BP	GO:0008299	isoprenoid biosynthetic process	IEP	Predicted GO
CC	GO:0009579	thylakoid	IEP	Predicted GO
MF	GO:0016638	oxidoreductase activity, acting on the CH-NH2 group of donors	IEP	Predicted GO
MF	GO:0016641	oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor	IEP	Predicted GO
MF	GO:0035673	oligopeptide transmembrane transporter activity	IEP	Predicted GO
MF	GO:0042887	amide transmembrane transporter activity	IEP	Predicted GO
MF	GO:0048038	quinone binding	IEP	Predicted GO
MF	GO:1904680	peptide transmembrane transporter activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like	127	279
IPR013525	ABC_2_trans	439	646

External Links

No external refs found!