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  5. Brara.D02274.1

Brara.D02274.1


Description : C2H2-type subclass ZAT transcription factor


Gene families : OG_42_0000046 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000046_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.D02274.1
Cluster HCAA Clusters: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
At2g17180 No alias Zinc finger protein ZAT2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIJ0] 0.03 Orthogroups_2024-Update
At2g37430 No alias ZAT11 [Source:UniProtKB/TrEMBL;Acc:A0A178VNJ8] 0.04 Orthogroups_2024-Update
Brara.B01283.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.I00845.1 No alias C2H2-type subclass ZAT transcription factor 0.03 Orthogroups_2024-Update
Glyma.15G040700 No alias C2H2-type zinc finger family protein 0.04 Orthogroups_2024-Update
HORVU3Hr1G086790.2 No alias Unknown function 0.02 Orthogroups_2024-Update
MA_109421g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_70076g0010 No alias (at1g02040 : 115.0) C2H2-type zinc finger family... 0.03 Orthogroups_2024-Update
PSME_00056418-RA No alias (at1g02040 : 111.0) C2H2-type zinc finger family... 0.03 Orthogroups_2024-Update
PSME_00056858-RA No alias (at5g56200 : 86.7) C2H2 type zinc finger transcription... 0.03 Orthogroups_2024-Update
Seita.1G261200.1 No alias C2H2-type subclass ZAT transcription factor & C2H2-type... 0.03 Orthogroups_2024-Update
Sobic.005G025100.1 No alias C2H2-type subclass ZAT transcription factor 0.03 Orthogroups_2024-Update
Sobic.009G164600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc09g008440 No alias Zinc finger family protein (AHRD V3.3 *** B9N876_POPTR) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0008131 primary amine oxidase activity IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Predicted GO
BP GO:0019751 polyol metabolic process IEP Predicted GO
BP GO:0043647 inositol phosphate metabolic process IEP Predicted GO
BP GO:0046164 alcohol catabolic process IEP Predicted GO
BP GO:0046174 polyol catabolic process IEP Predicted GO
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP Predicted GO
BP GO:0046855 inositol phosphate dephosphorylation IEP Predicted GO
MF GO:0048038 quinone binding IEP Predicted GO
BP GO:0071545 inositol phosphate catabolic process IEP Predicted GO
BP GO:1901616 organic hydroxy compound catabolic process IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!