Brara.D02300.1

Description : E3 ubiquitin ligase *(NLA)

Gene families : OG_42_0001676 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001676_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.D02300.1
Cluster	HCAA Clusters: Cluster_142

Target	Alias	Description	ECC score	Gene Family Method
Brara.J00136.1	No alias	E3 ubiquitin ligase *(NLA)	0.03	Orthogroups_2024-Update
Potri.016G064600	No alias	SPX (SYG1/Pho81/XPR1) domain-containing protein / zinc...	0.02	Orthogroups_2024-Update
Seita.9G153500.1	No alias	E3 ubiquitin ligase *(NLA)	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
MF	GO:0000287	magnesium ion binding	IEP	Predicted GO
MF	GO:0004860	protein kinase inhibitor activity	IEP	Predicted GO
MF	GO:0004861	cyclin-dependent protein serine/threonine kinase inhibitor activity	IEP	Predicted GO
BP	GO:0006397	mRNA processing	IEP	Predicted GO
MF	GO:0010333	terpene synthase activity	IEP	Predicted GO
BP	GO:0016071	mRNA metabolic process	IEP	Predicted GO
MF	GO:0016538	cyclin-dependent protein serine/threonine kinase regulator activity	IEP	Predicted GO
MF	GO:0016835	carbon-oxygen lyase activity	IEP	Predicted GO
MF	GO:0016838	carbon-oxygen lyase activity, acting on phosphates	IEP	Predicted GO
MF	GO:0019207	kinase regulator activity	IEP	Predicted GO
MF	GO:0019210	kinase inhibitor activity	IEP	Predicted GO
MF	GO:0019887	protein kinase regulator activity	IEP	Predicted GO
MF	GO:0030291	protein serine/threonine kinase inhibitor activity	IEP	Predicted GO
BP	GO:0051726	regulation of cell cycle	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR027370	Znf-RING_LisH	229	253

External Links

No external refs found!