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  5. Brara.D02334.1

Brara.D02334.1


Description : synthase component of pyridoxal 5-phosphate synthase complex


Gene families : OG_42_0002804 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002804_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.D02334.1
Cluster HCAA Clusters: Cluster_400

Target Alias Description ECC score Gene Family Method Actions
Glyma.13G225000 No alias Aldolase-type TIM barrel family protein 0.03 Orthogroups_2024-Update
HORVU2Hr1G065120.1 No alias synthase component of pyridoxal 5-phosphate synthase complex 0.02 Orthogroups_2024-Update
MA_10434121g0010 No alias (q9at63|pdx1_ginbi : 167.0) Pyridoxin biosynthesis... 0.02 Orthogroups_2024-Update
PSME_00049010-RA No alias (q9at63|pdx1_ginbi : 296.0) Pyridoxin biosynthesis... 0.02 Orthogroups_2024-Update
Potri.006G100500 No alias Aldolase-type TIM barrel family protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004664 prephenate dehydratase activity IEP Predicted GO
BP GO:0006558 L-phenylalanine metabolic process IEP Predicted GO
MF GO:0008061 chitin binding IEP Predicted GO
BP GO:0009094 L-phenylalanine biosynthetic process IEP Predicted GO
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Predicted GO
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR033983 Thiazole_synthase_ThiG 208 257
IPR033755 PdxS/SNZ_N 25 200
No external refs found!