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At2g13600


Description : Pentatricopeptide repeat-containing protein At2g13600 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIT7]


Gene families : OG_42_0009146 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009146_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At2g13600
Cluster HCCA clusters: Cluster_192

Target Alias Description ECC score Gene Family Method Actions
Glyma.12G055700 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003887 DNA-directed DNA polymerase activity IEP Predicted GO
BP GO:0006547 histidine metabolic process IEP Predicted GO
BP GO:0007062 sister chromatid cohesion IEP Predicted GO
BP GO:0007064 mitotic sister chromatid cohesion IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
MF GO:0008324 cation transmembrane transporter activity IEP Predicted GO
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
BP GO:0022402 cell cycle process IEP Predicted GO
CC GO:0031390 Ctf18 RFC-like complex IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
BP GO:0052803 imidazole-containing compound metabolic process IEP Predicted GO
BP GO:1903047 mitotic cell cycle process IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 349 397
IPR002885 Pentatricopeptide_repeat 116 162
IPR002885 Pentatricopeptide_repeat 216 264
IPR002885 Pentatricopeptide_repeat 457 503
IPR002885 Pentatricopeptide_repeat 293 318
IPR002885 Pentatricopeptide_repeat 531 556
IPR002885 Pentatricopeptide_repeat 87 115
IPR002885 Pentatricopeptide_repeat 59 86
IPR002885 Pentatricopeptide_repeat 600 626
No external refs found!