1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Brara.D02525.1

Brara.D02525.1


Description : calcium sensor *(CML)


Gene families : OG_42_0007947 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007947_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.D02525.1
Cluster HCAA Clusters: Cluster_207

Target Alias Description ECC score Gene Family Method Actions
A4A49_19652 No alias putative calcium-binding protein cml36 0.04 Orthogroups_2024-Update
A4A49_34239 No alias putative calcium-binding protein cml35 0.03 Orthogroups_2024-Update
Glyma.19G132800 No alias Calcium-binding EF-hand family protein 0.03 Orthogroups_2024-Update
LOC_Os11g04560 No alias calmodulin-like protein 1, putative, expressed 0.02 Orthogroups_2024-Update
Solyc10g079420 No alias Calcium-binding EF-hand (AHRD V3.3 *** A0A103XQG1_CYNCS) 0.03 Orthogroups_2024-Update
Sopen10g030390 No alias EF hand 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Predicted GO
BP GO:0006325 chromatin organization IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006479 protein methylation IEP Predicted GO
BP GO:0008213 protein alkylation IEP Predicted GO
MF GO:0008276 protein methyltransferase activity IEP Predicted GO
MF GO:0016278 lysine N-methyltransferase activity IEP Predicted GO
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
BP GO:0016571 histone methylation IEP Predicted GO
MF GO:0016832 aldehyde-lyase activity IEP Predicted GO
BP GO:0018022 peptidyl-lysine methylation IEP Predicted GO
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Predicted GO
MF GO:0032182 ubiquitin-like protein binding IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
BP GO:0034968 histone lysine methylation IEP Predicted GO
MF GO:0035299 inositol pentakisphosphate 2-kinase activity IEP Predicted GO
MF GO:0035673 oligopeptide transmembrane transporter activity IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
MF GO:0042054 histone methyltransferase activity IEP Predicted GO
MF GO:0042887 amide transmembrane transporter activity IEP Predicted GO
MF GO:0043130 ubiquitin binding IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
MF GO:1904680 peptide transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 146 208
IPR002048 EF_hand_dom 70 129
No external refs found!